Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2109 |
Symbol | |
ID | 6968145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2013502 |
End bp | 2015187 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643386008 |
Product | inner membrane ABC transporter ATP-binding protein |
Protein accession | YP_002270497 |
Protein GI | 209399273 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.356794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.522774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAACCA TTCCCATTAC GTTTTGTATG TTGATAGCAA AGTATCTCTG TCTGCTGAAG CCCTTTTGGC TGCGTAAGAA TAATAAAACT TCAGTGTTGT TAATCATTAT TATCCTCGCC ATGATCCTTG GCGTGGTTAA AATTCAGGTC TGGTTAAACG ACTGGAATAA TGATTTTTTC AATGCGCTAA GCCAGAAAGA AACCGATAAG CTTTGGCAGC TTGTCCTTTG GTTCCCTGCC CTGCTGGGGA TCTTTGTATT AATATCCGTA AACAAAACAT GGTTAATTAA ACTACTGACT ATTCGCTGGC GCGAATGGTT AACAGATTAC TACCTTAATC GCTGGTTTGC AGATAAAAAC TACTACTTCA CGCAGATCTA CGGCGAGCAT AAAAATACAG ATAACCCTGA CCAACGTATC GCTGAAGACA TTCTCTTACT GATCAGCAAA ACGCTCAGTC TTTCATTTGG CTTCATCCAG TCACTTAGCA TGCTGATCAC CTTTACCGTT ATTCTTTGGC AAAGCGCGGG TATGCTCTCA TTCACTGTTG GTGGAACAGA ATGGAATATC CAGGGGTATA TGGTCTATAC CGTTGTGCTC ATTGTGATCG GTGGAACTTT ATTTACCCAT AAGGTGGGTA AACGTATTCG TCCGCTTAAT GTGGAAAAAC AACGTAGCGA AGCGACATTT CGAACTAATC TTGTGCAGCA TAATAAGCAG GCAGAACTGA TTGCGCTAAG CAATGCTGAG TCTCTACAAC GCCAGGAGTT GAGCGACAAT TTTCATACCA TTAAAGAGAA CTGGCATCGT TTAATGAATC GTCAGCGGTG GCTTGATTAC TGGCAGAATA TTTATTCGCG CTCGCTTAGC GTTCTTCCCT ACTTTCTGTT ATTGCCGCAG TTTATTAGCG GGCAGATCAA TCTGGGCGGA CTGATGAAAT CGCGCCAGGC ATTTATGCTG GTATCGAACA ATCTAAGCTG GTTTATTTAT AAATATGATG AACTTGCTGA ACTGGCTGCG GTTATCGATC GCTTGTATGA GTTCCATCAA CTCACCGAAC AGCGCCCTAC GAATAAGCCT AAAAATTGCC AACATGCGGT ACAAGTGGCT GACGCGAGTA TTCGTACTCC TGATAATAAG ATCATATTAG AGAACCTGAA CTTTCATGTT TCGCCAGGCA AATGGCTATT ACTGAAAGGT TACTCTGGTG CGGGAAAAAC CACACTGCTT AAAACATTAT CCCACTGCTG GCCGTGGTTT AAAGGTGATA TTTCTTCTCC TGCCGACAGT TGGTATGTGT CACAAACACC GTTAATCAAA ACCGGCTTAC TGAAAGAGAT TATTTGTAAA GCACTTCCCC TGCCCGTAGA CGATAAATCA TTGAGCGAAG TACTGCATCA GGTTGGTCTT GGGAAATTGG CTGCGCGTAT TCATGACCAC GATCGCTGGG GAGATATTCT TTCCAGCGGC GAAAAACAAC GTATCGCCCT GGCACGATTA ATTTTACGAC GTCCGAAATG GATATTTCTT GACGAAACTA CCTCTCATCT TGAGGAACAA GAGGCTATCC GCTTACTGCG TCTAGTGCGT GAAAAACTAC CCACAAGCGG CGTCATTATG GTTACACATC AACCCGGTGT CTGGAACCTG GCCGATGATA TTTGTGACAT TAGCGCGGTT TTATAA
|
Protein sequence | MITIPITFCM LIAKYLCLLK PFWLRKNNKT SVLLIIIILA MILGVVKIQV WLNDWNNDFF NALSQKETDK LWQLVLWFPA LLGIFVLISV NKTWLIKLLT IRWREWLTDY YLNRWFADKN YYFTQIYGEH KNTDNPDQRI AEDILLLISK TLSLSFGFIQ SLSMLITFTV ILWQSAGMLS FTVGGTEWNI QGYMVYTVVL IVIGGTLFTH KVGKRIRPLN VEKQRSEATF RTNLVQHNKQ AELIALSNAE SLQRQELSDN FHTIKENWHR LMNRQRWLDY WQNIYSRSLS VLPYFLLLPQ FISGQINLGG LMKSRQAFML VSNNLSWFIY KYDELAELAA VIDRLYEFHQ LTEQRPTNKP KNCQHAVQVA DASIRTPDNK IILENLNFHV SPGKWLLLKG YSGAGKTTLL KTLSHCWPWF KGDISSPADS WYVSQTPLIK TGLLKEIICK ALPLPVDDKS LSEVLHQVGL GKLAARIHDH DRWGDILSSG EKQRIALARL ILRRPKWIFL DETTSHLEEQ EAIRLLRLVR EKLPTSGVIM VTHQPGVWNL ADDICDISAV L
|
| |