Gene ECH74115_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2106 
SymbolgadA 
ID6966988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2006491 
End bp2007891 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content54% 
IMG OID643386005 
Productglutamate decarboxylase GadA 
Protein accessionYP_002270494 
Protein GI209399389 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID[TIGR01788] glutamate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.139391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGA AGCAAGTAAC GGATTTAAGG TCGGAACTAC TCGATTCACG TTTTGGTGCG 
AAGTCTATTT CCACTATCGC AGAATCAAAA CGTTTTCCGC TGCACGAAAT GCGCGACGAT
GTCGCATTTC AGATTATCAA TGACGAATTA TATCTTGATG GCAACGCTCG TCAGAACCTG
GCCACTTTCT GCCAGACCTG GGACGACGAA AACGTCCACA AGTTGATGGA TTTATCCATT
AACAAAAACT GGATCGACAA AGAAGAATAT CCGCAATCTG CAGCCATCGA CCTGCGTTGC
GTAAATATGG TTGCCGATCT GTGGCATGCG CCTGCGCCGA AAAATGGTCA GGCCGTTGGC
ACCAACACCA TTGGTTCTTC CGAGGCCTGT ATGCTCGGCG GGATGGCGAT GAAATGGCGT
TGGCGCAAGC GTATGGAAGC TGCAGGCAAA CCAACGGATA AACCAAACCT GGTGTGCGGC
CCGGTGCAAA TCTGCTGGCA TAAATTCGCC CGCTACTGGG ATGTGGAGCT GCGTGAGATC
CCTATGCGCC CCGGTCAGTT GTTTATGGAT CCGAAACGCA TGATTGAAGC CTGCGACGAA
AATACCATCG GCGTGGTGCC GACTTTCGGC GTGACCTACA CCGGTAACTA TGAGTTCCCG
CAACCGCTGC ACGATGCGCT GGATAAATTC CAGGCCGACA CCGGTATCGA CATCGACATG
CACATCGACG CCGCCAGTGG TGGCTTCCTG GCACCGTTCG TCGCCCCGGA TATCGTCTGG
GACTTCCGCC TGCCGCGTGT GAAATCGATC AGTGCTTCAG GCCACAAATT CGGTCTGGCT
CCGCTGGGCT GCGGCTGGGT TATCTGGCGT GATGAAGAAG CGCTGCCGCA GGAACTGGTG
TTCAACGTTG ACTACCTCGG TGGTCAGATT GGTACTTTCG CCATCAACTT CTCCCGCCCG
GCGGGTCAGG TAATTGCACA GTACTATGAA TTCCTGCGCC TCGGTCGTGA AGGCTATACC
AAAGTACAGA ACGCCTCTTA CCAGGTTGCC GCTTATCTGG CGGATGAAAT CGCCAAACTG
GGGCCGTATG AGTTCATCTG TACCGGTCGC CCGGACGAAG GCATTCCGGC GGTTTGCTTC
AAACTGAAAG ATGGTGAAGA TCCGGGATAC ACCCTGTATG ACCTCTCTGA ACGTCTGCGT
CTGCGCGGCT GGCAGGTTCC GGCCTTCACT CTCGGCGGTG AAGCCACCGA CATCGTGGTG
ATGCGCATTA TGTGTCGTCG CGGCTTCGAA ATGGACTTTG CTGAACTGTT GCTGGAAGAC
TACAAAGCCT CCCTGAAATA TCTCAGTGAT CACCCGAAAC TGCAGGGTAT TGCCCAACAG
AACAGCTTTA AACATACCTG A
 
Protein sequence
MDKKQVTDLR SELLDSRFGA KSISTIAESK RFPLHEMRDD VAFQIINDEL YLDGNARQNL 
ATFCQTWDDE NVHKLMDLSI NKNWIDKEEY PQSAAIDLRC VNMVADLWHA PAPKNGQAVG
TNTIGSSEAC MLGGMAMKWR WRKRMEAAGK PTDKPNLVCG PVQICWHKFA RYWDVELREI
PMRPGQLFMD PKRMIEACDE NTIGVVPTFG VTYTGNYEFP QPLHDALDKF QADTGIDIDM
HIDAASGGFL APFVAPDIVW DFRLPRVKSI SASGHKFGLA PLGCGWVIWR DEEALPQELV
FNVDYLGGQI GTFAINFSRP AGQVIAQYYE FLRLGREGYT KVQNASYQVA AYLADEIAKL
GPYEFICTGR PDEGIPAVCF KLKDGEDPGY TLYDLSERLR LRGWQVPAFT LGGEATDIVV
MRIMCRRGFE MDFAELLLED YKASLKYLSD HPKLQGIAQQ NSFKHT