Gene ECH74115_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2046 
SymbolydcT 
ID6968166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1943171 
End bp1944184 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content55% 
IMG OID643385958 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_002270447 
Protein GI209398098 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000000000000987436 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTACG CAGTGGAGTT TGACAACGTC TCGCGGTTGT ACGGTGACGT GCGCGCAGTA 
GATGGCGTCA GTATTGCGAT AAAAGATGGT GAGTTCTTCT CTATGCTGGG GCCGTCCGGC
TCCGGCAAAA CCACCTGCCT GCGCCTGATT GCTGGCTTCG AACAGCTTTC CGGCGGGGCT
ATCTCTATCT TTGGTAAACC CGCCAGCAAT CTGCCACCGT GGGAGCGGGA CGTGAATACT
GTCTTTCAGG ACTACGCGCT ATTTCCGCAT ATGTCGATTC TTGACAATGT CGCCTATGGG
CTGATGGTCA AAGGCGTGAA TAAAAAGCAG CGGCACGCAA TGGCGCAAGA GGCGCTGGAG
AAAGTGGCGT TGGGGTTTGT ACAGCAACGT AAACCGTCAC AACTTTCTGG TGGTCAGCGC
CAGCGGGTTG CTATCGCCAG AGCATTGGTG AATGAACCGC GCGTATTGCT GTTGGATGAA
CCGCTCGGCG CACTGGATCT CAAATTGCGT GAGCAGATGC AGCTTGAGCT GAAAAAACTG
CAACAGTCTC TCGGTATCAC TTTTATCTGC GTTACCCACG ATCAGGGCGA AGCGTTATCG
ATGTCCGATC GTGTGGCGGT TTTCAATAAT GGACGCATTG AGCAGGTCGA TTCCCCGCGC
GATCTCTATA TGCGCCCGCG CACGCCGTTT GTTGCCGGGT TCGTTGGTAC ATCGAATGTT
TTTGATGGAC TGATGGCAGA GAAACTTTGT GGCATGACGG GAAGCTTCGC CCTGCGGCCG
GAACATATCC GCCTCAACAC CCCTGGTGAA CTGCAGGCCA ATGGCACGAT CCAGGCGGTG
CAATATCAGG GCGCGGCAAC TCGTTTTGAA CTGAAATTGA ACGGCGGTGA AAAACTGCTG
GTGAGTCAGG CCAATATGAC AGGCGAAGAA CTGCCTGCCA CGCTCACGCC CGGACAACAG
GTGATGGTTT CCTGGTCGCG TGATGTGATG GTGCCGCTGG TTGAGGAGAG GTGA
 
Protein sequence
MTYAVEFDNV SRLYGDVRAV DGVSIAIKDG EFFSMLGPSG SGKTTCLRLI AGFEQLSGGA 
ISIFGKPASN LPPWERDVNT VFQDYALFPH MSILDNVAYG LMVKGVNKKQ RHAMAQEALE
KVALGFVQQR KPSQLSGGQR QRVAIARALV NEPRVLLLDE PLGALDLKLR EQMQLELKKL
QQSLGITFIC VTHDQGEALS MSDRVAVFNN GRIEQVDSPR DLYMRPRTPF VAGFVGTSNV
FDGLMAEKLC GMTGSFALRP EHIRLNTPGE LQANGTIQAV QYQGAATRFE LKLNGGEKLL
VSQANMTGEE LPATLTPGQQ VMVSWSRDVM VPLVEER