Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2046 |
Symbol | ydcT |
ID | 6968166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1943171 |
End bp | 1944184 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643385958 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_002270447 |
Protein GI | 209398098 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000000000987436 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGTACG CAGTGGAGTT TGACAACGTC TCGCGGTTGT ACGGTGACGT GCGCGCAGTA GATGGCGTCA GTATTGCGAT AAAAGATGGT GAGTTCTTCT CTATGCTGGG GCCGTCCGGC TCCGGCAAAA CCACCTGCCT GCGCCTGATT GCTGGCTTCG AACAGCTTTC CGGCGGGGCT ATCTCTATCT TTGGTAAACC CGCCAGCAAT CTGCCACCGT GGGAGCGGGA CGTGAATACT GTCTTTCAGG ACTACGCGCT ATTTCCGCAT ATGTCGATTC TTGACAATGT CGCCTATGGG CTGATGGTCA AAGGCGTGAA TAAAAAGCAG CGGCACGCAA TGGCGCAAGA GGCGCTGGAG AAAGTGGCGT TGGGGTTTGT ACAGCAACGT AAACCGTCAC AACTTTCTGG TGGTCAGCGC CAGCGGGTTG CTATCGCCAG AGCATTGGTG AATGAACCGC GCGTATTGCT GTTGGATGAA CCGCTCGGCG CACTGGATCT CAAATTGCGT GAGCAGATGC AGCTTGAGCT GAAAAAACTG CAACAGTCTC TCGGTATCAC TTTTATCTGC GTTACCCACG ATCAGGGCGA AGCGTTATCG ATGTCCGATC GTGTGGCGGT TTTCAATAAT GGACGCATTG AGCAGGTCGA TTCCCCGCGC GATCTCTATA TGCGCCCGCG CACGCCGTTT GTTGCCGGGT TCGTTGGTAC ATCGAATGTT TTTGATGGAC TGATGGCAGA GAAACTTTGT GGCATGACGG GAAGCTTCGC CCTGCGGCCG GAACATATCC GCCTCAACAC CCCTGGTGAA CTGCAGGCCA ATGGCACGAT CCAGGCGGTG CAATATCAGG GCGCGGCAAC TCGTTTTGAA CTGAAATTGA ACGGCGGTGA AAAACTGCTG GTGAGTCAGG CCAATATGAC AGGCGAAGAA CTGCCTGCCA CGCTCACGCC CGGACAACAG GTGATGGTTT CCTGGTCGCG TGATGTGATG GTGCCGCTGG TTGAGGAGAG GTGA
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Protein sequence | MTYAVEFDNV SRLYGDVRAV DGVSIAIKDG EFFSMLGPSG SGKTTCLRLI AGFEQLSGGA ISIFGKPASN LPPWERDVNT VFQDYALFPH MSILDNVAYG LMVKGVNKKQ RHAMAQEALE KVALGFVQQR KPSQLSGGQR QRVAIARALV NEPRVLLLDE PLGALDLKLR EQMQLELKKL QQSLGITFIC VTHDQGEALS MSDRVAVFNN GRIEQVDSPR DLYMRPRTPF VAGFVGTSNV FDGLMAEKLC GMTGSFALRP EHIRLNTPGE LQANGTIQAV QYQGAATRFE LKLNGGEKLL VSQANMTGEE LPATLTPGQQ VMVSWSRDVM VPLVEER
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