Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2040 |
Symbol | |
ID | 6968741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1937093 |
End bp | 1939096 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643385952 |
Product | peptidase, U32 family |
Protein accession | YP_002270441 |
Protein GI | 209395986 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0020805 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 3.90569e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTAAAA TAGCCGCCAT TTTTCAGCTA CTGGATAAGA ATGTGACCGT ATCTTCTCAT CGACTTGAAC TGTTAAGCCC GGCACGCGAT GCCGCCATTG CCCGCGAAGC TATTTTGCAC GGTGCCGATG CTGTTTATAT CGGCGGCCCT GGTTTTGGTG CCCGTCATAA TGCCAGTAAT AGCCTGAAAG ATATTGCCGA GCTGGTGCCG TTTGCCCATC GTTATGGTGC AAAAATTTTC GTCACGCTTA ACACCATTTT GCATGATGAT GAGCTGGAAC CCGCGCAACG GCTGATTACT GACCTCTACC AGACCGGTGT CGATGCGCTG ATTGTTCAGG ATATGGGGAT TCTGGAACTT GATATTCCGC CGATTGAACT GCACGCCAGT ACGCAGTGCG ACATTCGTAC AGTAGAAAAA GCGAAGTTCC TCTCTGATGT TGGCTTCACG CAGATTGTGC TGGCGCGAGA GCTGAATCTT GATCAGATCC GCGCGATTCA CCAGGCCACG GACGCGACCA TTGAATTCTT TATTCATGGC GCACTGTGCG TGGCCTATTC GGGTCAGTGC TACATTTCTC ATGCGCAAAC AGGGCGTAGC GCCAACCGTG GCGATTGCTC GCAAGCGTGC CGTTTGCCAT ACACATTGAA AGACGATCAG GGGCGGGTGG TTTCCTATGA AAAACATCTG CTGTCGATGA AAGATAACGA TCAGACTGCC AACCTCGGCG CGCTGATTGA TGCTGGCGTA CGTTCCTTCA AGATTGAAGG GCGTTACAAA GATATGAGCT ACGTGAAGAA TATCACCGCC CATTATCGCC AGATGCTTGA TGCCATTATT GAAGAACGTG GCGATCTGGC GCGCGCTTCA TCAGGTCGTA CTGAACATTT CTTTGTTCCA TCGACGGAAA AGACTTTCCA CCGTGGTAGC ACAGATTATT TTGTGAATGC CCGTAAAGGC GATATTGGCG CGTTCGATTC GCCGAAATTT ATCGGCCTGC CGGTAGGTGA AGTAGTGAAA GTGGCGAAAG ATCATCTCGA TGTTGCCGTT ACCGAGCCAC TGGCAAATGG CGATGGCCTG AACGTGTTGA TTAAACGTGA AGTCGTCGGT TTTCGTGCCA ATACGGTCGA GAAAACCGGA GAAAATCAGT ACCGCGTCTG GCCCAATGAA ATGCCAGCAG ATTTGCACAA AATTCGCCCG CATCACCCAC TAAACCGTAA TCTTGATCAT AACTGGCAGC AGGCACTGAC AAAAACCTCT AGCGAACGTC GGGTGGCGGT AGACATTGAA CTGGGCGGTT GGCAGGAACA ATTGATTCTG ACTCTCACCA GTGAAGAGGG GGTCAGCATA ACGCATACGC TGGATGGGCA GTTCGACGAA GCCAATAACG CAGAAAAAGC AATGAACAAT CTGAAGGATG GTCTGGCAAA ACTGGGGCAA ACCCTCTATT ACGCCCGCGA TGTGCAAATT AATTTGCCGG GGGCGCTGTT TGTACCAAAC AGTCTGTTAA ACCAGTTCCG CCGTGAAGCT GCCGACATGC TGGATGCTGC GCGTCTTGCC AGTTACCAGC GCGGCAGCCG TAAACCGGTT GCTGATCCTG CGCCGGTTTA TCCGCAAACA CATCTGAGTT TCCTCGCGAA CGTTTACAAC CAGAAAGCGC GTGAATTTTA TCATCGCTAT GGTGTGCAGC TGATTGACGC GGCGTATGAG GCACATGAAG AGAAGGGCGA AGTCCCGGTG ATGATCACCA AGCATTGTCT GCGCTTTGCC TTTAATCTGT GCCCGAAACA GGCGAAAGGC AATATCAAAA GCTGGAAGGC GACGCCAATG CAACTGGTTA ACGGCGATGA AGTATTAACG CTAAAGTTTG ATTGCCGCCC ATGCGAGATG CACGTCATTG GCAAAATCAA AAATCACATA CTGAAAATGC CGTTACCGGG AAGCGTAGTG GCATCCGTAA GTCCGGATGA GCTGCTGAAA ACATTGCCGA AGCGAAAAGG GTAA
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Protein sequence | MAKIAAIFQL LDKNVTVSSH RLELLSPARD AAIAREAILH GADAVYIGGP GFGARHNASN SLKDIAELVP FAHRYGAKIF VTLNTILHDD ELEPAQRLIT DLYQTGVDAL IVQDMGILEL DIPPIELHAS TQCDIRTVEK AKFLSDVGFT QIVLARELNL DQIRAIHQAT DATIEFFIHG ALCVAYSGQC YISHAQTGRS ANRGDCSQAC RLPYTLKDDQ GRVVSYEKHL LSMKDNDQTA NLGALIDAGV RSFKIEGRYK DMSYVKNITA HYRQMLDAII EERGDLARAS SGRTEHFFVP STEKTFHRGS TDYFVNARKG DIGAFDSPKF IGLPVGEVVK VAKDHLDVAV TEPLANGDGL NVLIKREVVG FRANTVEKTG ENQYRVWPNE MPADLHKIRP HHPLNRNLDH NWQQALTKTS SERRVAVDIE LGGWQEQLIL TLTSEEGVSI THTLDGQFDE ANNAEKAMNN LKDGLAKLGQ TLYYARDVQI NLPGALFVPN SLLNQFRREA ADMLDAARLA SYQRGSRKPV ADPAPVYPQT HLSFLANVYN QKAREFYHRY GVQLIDAAYE AHEEKGEVPV MITKHCLRFA FNLCPKQAKG NIKSWKATPM QLVNGDEVLT LKFDCRPCEM HVIGKIKNHI LKMPLPGSVV ASVSPDELLK TLPKRKG
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