| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1983 |
|---|
| Symbol | abgT |
|---|
| ID | 6970902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1875421 |
|---|
| End bp | 1876953 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643385907 |
|---|
| Product | putative aminobenzoyl-glutamate transporter |
|---|
| Protein accession | YP_002270396 |
|---|
| Protein GI | 209399301 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
|---|
| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.328307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA GTATGTCATC CATACCGTCG TCCTCCCAAT CCGGGAAGCT CTATGGCTGG
GTCGAAAGAA TTGGTAACAA GGTTCCCCAT CCTTTTTTGC TCTTTATCTA TTTGATTATC
GTACTCATGG TGACGACGGC AATTTTGTCG GCCTTTGGCG TCAGTGCGAA AAACCCGACC
GATGGTACGC CGGTGGTGGT GAAAAACCTG CTCAGTGTGG AAGGATTACA CTGGTTTTTA
CCCAATGTTA TTAAAAACTT TAGCGGTTTT GCTCCACTTG GTGCGATCCT GGCGCTGGTT
TTAGGTGCCG GTCTGGCGGA GCGCGTCGGC TTACTGCCAG CACTAATGGT TAAAATGGCA
TCGCATGTTA ATGCCCGCTA CGCCAGTTAT ATGGTGCTGT TTATTGCTTT TTTCAGCCAC
ATTTCTTCCG ATGCGGCGTT AGTGATCATG CCACCGATGG GTGCGCTGAT TTTTCTGGCG
GTGGGCAGGC ATCCAGTTGC AGGTTTACTG GCTGCCATTG CAGGCGTAGG TTGCGGCTTT
ACGGCTAATT TACTGATTGT CACAACCGAC GTGTTGCTGT CGGGGATCAG CACGGAAGCG
GCAGCTGCGT TCAATCCGCA AATGCACGTC AGTGTAATTG ATAACTGGTA TTTTATGGCC
AGCTCCGTAG TCGTACTGAC GATTGTTGGC GGCCTGATAA CCGACAAAAT CATCGAGCCA
CGGTTAGGTC AATGGCAGGG AAACAGCGAT GAGAAACTGC AGACATTGAC CGAAAGTCAG
CGTTTTGGTT TACGCATAGC AGGTGTCGTA TCGCTACTTT TTATTGCTGC GATTGCGCTG
ATGGTGATCC CGGAAAACGG GATATTGCGC GATCCGATTA ATCACACCGT GATGCCATCA
CCCTTTATTA AAGGTATCGT GCCACTGATC ATTCTTTTTT TCTTTGTTGT CTCGCTGGCT
TATGGCATCG CTACCCGCAC AATTCGACGT CAGGCGGATT TACCGCATTT AATGATTGAA
CCGATGAAAG AGATGGCGGG ATTTATCGTG ATGGTTTTTC CCCTCGCCCA GTTTGTCGCC
ATGTTTAACT GGAGCAACAT GGGGAAATTC ATCGCCGTGG GGCTGACCGA TATCCTGGAA
AGTTCAGGGC TTAGCGGCAT CCCGGCGTTT GTCGGTCTGG CGTTGCTTTC CTCTTTCTTA
TGCATGTTTA TCGCCAGCGG TTCCGCAATC TGGTCGATTC TGGCCCCCAT TTTCGTACCA
ATGTTTATGC TACTTGGCTT TCACCCGGCA TTTGCGCAAA TCCTCTTTCG TATTGCCGAC
TCATCCGTAT TGCCTTTAGC GCCAGTATCT CCTTTTGTTC CACTGTTTCT TGGATTCCTG
CAACGCTACA AACCAGACGC GAAACTGGGT ACTTACTATT CGTTAGTCTT GCCCTATCCG
CTTATCTTTT TGGTGGTATG GCTGCTGATG TTGCTGGCGT GGTATCTTGT GGGCCTGCCG
ATAGGTCCGG GTATTTACCC ACGTTTGTCT TAA
|
|---|
| Protein sequence | MPMSMSSIPS SSQSGKLYGW VERIGNKVPH PFLLFIYLII VLMVTTAILS AFGVSAKNPT
DGTPVVVKNL LSVEGLHWFL PNVIKNFSGF APLGAILALV LGAGLAERVG LLPALMVKMA
SHVNARYASY MVLFIAFFSH ISSDAALVIM PPMGALIFLA VGRHPVAGLL AAIAGVGCGF
TANLLIVTTD VLLSGISTEA AAAFNPQMHV SVIDNWYFMA SSVVVLTIVG GLITDKIIEP
RLGQWQGNSD EKLQTLTESQ RFGLRIAGVV SLLFIAAIAL MVIPENGILR DPINHTVMPS
PFIKGIVPLI ILFFFVVSLA YGIATRTIRR QADLPHLMIE PMKEMAGFIV MVFPLAQFVA
MFNWSNMGKF IAVGLTDILE SSGLSGIPAF VGLALLSSFL CMFIASGSAI WSILAPIFVP
MFMLLGFHPA FAQILFRIAD SSVLPLAPVS PFVPLFLGFL QRYKPDAKLG TYYSLVLPYP
LIFLVVWLLM LLAWYLVGLP IGPGIYPRLS
|
|---|
| |