Gene ECH74115_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1981 
Symbolfnr 
ID6969598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1873948 
End bp1874700 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content51% 
IMG OID643385905 
Productfumarate/nitrate reduction transcriptional regulator 
Protein accessionYP_002270394 
Protein GI209399588 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.320226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGG AAAAGCGAAT TATACGGCGC ATTCAGTCTG GCGGTTGTGC TATCCATTGC 
CAGGATTGCA GCATCAGCCA GCTTTGCATC CCGTTCACAC TCAACGAACA TGAGCTTGAT
CAGCTTGATA ATATCATTGA GCGGAAGAAG CCTATTCAGA AAGGCCAGAC GCTGTTTAAG
GCTGGTGATG AACTTAAATC GCTTTATGCC ATCCGCTCCG GTACGATTAA AAGTTATACC
ATCACTGAGC AAGGCGACGA GCAAATCACT GGTTTCCATT TAGCAGGCGA CCTGGTGGGA
TTTGACGCCA TCGGCAGCGG CCATCACCCG AGCTTCGCGC AGGCGCTGGA AACCTCGATG
GTATGTGAAA TCCCGTTCGA AACGCTGGAC GATTTGTCCG GTAAAATGCC GAATCTGCGT
CAGCAGATGA TGCGTCTGAT GAGCGGTGAA ATCAAAGGCG ATCAGGACAT GATCCTGCTG
TTGTCAAAGA AAAATGCCGA GGAACGTCTG GCTGCATTCA TCTACAACCT GTCCCGTCGT
TTTGCCCAAC GCGGCTTCTC CCCTCGTGAA TTCCGCCTGA CGATGACTCG TGGCGATATC
GGTAACTATC TGGGCCTGAC GGTAGAAACC ATCAGCCGTC TGCTGGGTCG CTTCCAGAAA
AGCGGTATGC TGGCAGTCAA AGGTAAATAC ATCACCATCG AAAATAACGA TACGCTGGCC
CAGCTTGCTG GTCATACGCG TAACGTTGCC TGA
 
Protein sequence
MIPEKRIIRR IQSGGCAIHC QDCSISQLCI PFTLNEHELD QLDNIIERKK PIQKGQTLFK 
AGDELKSLYA IRSGTIKSYT ITEQGDEQIT GFHLAGDLVG FDAIGSGHHP SFAQALETSM
VCEIPFETLD DLSGKMPNLR QQMMRLMSGE IKGDQDMILL LSKKNAEERL AAFIYNLSRR
FAQRGFSPRE FRLTMTRGDI GNYLGLTVET ISRLLGRFQK SGMLAVKGKY ITIENNDTLA
QLAGHTRNVA