| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1944 |
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| Symbol | gabT1 |
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| ID | 6966924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1840373 |
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| End bp | 1841638 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643385874 |
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| Product | 4-aminobutyrate transaminase |
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| Protein accession | YP_002270363 |
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| Protein GI | 209400873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.991898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA ATGAATTCCA TCAGCGTCGT CTTTCTGCCA CCCCGCGCGG GGTTGGCGTG
ATGTGTAACT TCTTCGCCCA GTCGGCTGAA AACGCCACGC TGAAGGATGT TGAGGGCAAC
GAGTACATCG ATTTCGCCGC AGGCATTGCG GTGCTGAATA CCGGACATCG CCACCCTGAT
CTGGTCGCGG CGGTGGAGCA GCAGCTGCAA CAGTTTACCC ACACCGCGTA TCAGATTGTG
CCATATGAAA GCTACGTCAC CCTGGCGGAG AAAATCAACG CCCTTGCCCC GGTGAGCGGG
CAGGCCAAAA CCGCGTTCTT CACCACCGGT GCGGAAGCGG TGGAAAACGC GGTGAAAATC
GCCCGCGCCC ATACCGGACG CCCTGGCGTG ATTGCGTTTA GCGGCGGCTT CCACGGTCGT
ACGTATATGA CTATGGCGTT AACTGGAAAG GTCGCGCCGT ACAAAATCGG CTTCGGCCCG
TTCCCTGGTT CGGTGTATCA CGTACCTTAT CCGTCAGATT TACACGGCAT TTCAACACAG
GACTCCCTCG ACGCCATCGA ACGCTTGTTT AAATCAGACA TCGAAGCGAA GCAGGTCGCG
GCCATTATTT TCGAACCGGT GCAGGGCGAG GGCGGTTTCA ACGTTGCGCC AAAAGAGCTG
GTTGCCGCCA TTCGCCGCCT GTGCGACGAG CACGGTATTG TGATGATTGC CGATGAAGTG
CAAAGCGGCT TTGCGCGTAC CGGCAAACTG TTTGCGATGG ATCATTACGC CGATAAGCCG
GACTTAATGA CGATGGCGAA AAGCCTCGCG GGCGGGATGC CGCTTTCGGG TGTGGTCGGT
AACGCGAATA TTATGGACGC GCCCGCGCCG GGCGGGCTTG GCGGCACCTA CGCCGGGAAT
CCGCTGGCGG TGGCTGCCGC GCACGCGGTG CTCAACATTA TCGACAAAGA GTCACTCTGT
GAGCGCGCCA TGCAGTTGGG GCAGCGTCTG ACGAAAACCC TGATTGATGC CAAAGAAAAC
GTTCCGGCCA TCGCGGCGGT ACGTGGTCTG GGCTCGATGA TTGCGGCAGA ATTTAACGAC
CCGCAAACGG GCGAGCCGTC AGCCGCCATT GCGCAAAAAA TTCAGCAACG CGCGCTGGCG
CAGGGACTGC TTCTACTGAC CTGTGGCGCA TACGGCAACG TGATTCGTTT CCTGTATCCG
CTGACCATCC CGGATGCGCA ATTCGATGCG GCAATGAAAA TTTTGCAGGA TGCGCTGAGA
GATTAA
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| Protein sequence | MSNNEFHQRR LSATPRGVGV MCNFFAQSAE NATLKDVEGN EYIDFAAGIA VLNTGHRHPD
LVAAVEQQLQ QFTHTAYQIV PYESYVTLAE KINALAPVSG QAKTAFFTTG AEAVENAVKI
ARAHTGRPGV IAFSGGFHGR TYMTMALTGK VAPYKIGFGP FPGSVYHVPY PSDLHGISTQ
DSLDAIERLF KSDIEAKQVA AIIFEPVQGE GGFNVAPKEL VAAIRRLCDE HGIVMIADEV
QSGFARTGKL FAMDHYADKP DLMTMAKSLA GGMPLSGVVG NANIMDAPAP GGLGGTYAGN
PLAVAAAHAV LNIIDKESLC ERAMQLGQRL TKTLIDAKEN VPAIAAVRGL GSMIAAEFND
PQTGEPSAAI AQKIQQRALA QGLLLLTCGA YGNVIRFLYP LTIPDAQFDA AMKILQDALR
D
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