Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1940 |
Symbol | puuD |
ID | 6969742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1836080 |
End bp | 1836832 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643385870 |
Product | gamma-glutamyl-gamma-aminobutyrate hydrolase |
Protein accession | YP_002270359 |
Protein GI | 209400761 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.343934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATC CGGTTATCGG TGTCGTAATG TGCAGGAACA GGCTTAAGGG GCATGCGACC CAGACTCTGC AAGAAAAGTA CCTGAATGCC ATCATCCACG CAGGCGGCTT GCCAATTGCG CTGCCACATG CGCTGGCGGA ACCGTCGTTA CTTGAACAAC TTTTGCCGAA ACTCGATGGC ATTTACCTTC CTGGTAGTCC CAGCAATGTG CAGCCGCACC TATATGGTGA AAACGGCGAT GAGCCTGACG CCGATCCCGA GCGTGATCTT CTGAGCATGG CGTTAATTAA TGCCGCACTC GAAAGGCGCA TCCCCATTTT CGCCATCTGC CGGGGTTTAC AGGAACTGGT GGTGGCAACC GGTGGTTCGT TGCATCGCAA GCTGTGCGAA CAGCCTGAAT TGCTGGAACA TCGGGAAGAT CCCGAACTGC CGGTGGAACA GCAATATGCA CCGTCGCATG AAGTTCAGGT TGAAGAGGGG GGATTGCTGT CTGCATTGTT ACCTGAATGT AGCAACTTTT GGGTAAACTC TCTGCATGGA CAAGGGGCGA AGGTCGTTAG CCCACGGTTG CGTGTTGAAG CTCGCTCGCC GGATGGCTTA GTTGAGGCGG TTAGTGTCAT CAATCATCCT TTTGCGCTGG GCGTACAGTG GCACCCGGAA TGGAACAGTA GCGAGTACGC GCTTTCGCGT ATATTGTTCG AGGGCTTTAT CACCGCTTGT CAGCACCATA TCGCTGAAAA ACAGCGACTC TGA
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Protein sequence | MNNPVIGVVM CRNRLKGHAT QTLQEKYLNA IIHAGGLPIA LPHALAEPSL LEQLLPKLDG IYLPGSPSNV QPHLYGENGD EPDADPERDL LSMALINAAL ERRIPIFAIC RGLQELVVAT GGSLHRKLCE QPELLEHRED PELPVEQQYA PSHEVQVEEG GLLSALLPEC SNFWVNSLHG QGAKVVSPRL RVEARSPDGL VEAVSVINHP FALGVQWHPE WNSSEYALSR ILFEGFITAC QHHIAEKQRL
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