Gene ECH74115_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1689 
Symbolipk 
ID6969234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1629404 
End bp1630255 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content54% 
IMG OID643385648 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_002270142 
Protein GI209396316 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.47576e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.968423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACAC AGTGGCCCTC TCCGGCAAAA CTTAATCTGT TTTTATACAT TACCGGTCAG 
CGTGCGGATG GTTACCACAC GCTGCAAACG CTGTTTCAGT TTCTTGATTA CGGCGACACC
ATCAGCATTG AGCTTCGTGA CGATGGGGAT ATCCGTCTGT TAACGCCCGT TGAAGGCGTG
GAACATGAAG ATAACCTGAT CGTTCGCGCA GCGCGGTTGT TGATGAAAAC TGCGGCAGAC
AGCGGGCGTC TTCCGACGGG AAGCGGTGCG AATATCAGCA TTGACAAGCG TTTGCCGATG
GGCGGCGGTC TCGGCGGTGG TTCATCCAAT GCCGCGACGG TCCTGGTGGC ATTAAATCAT
CTCTGGCAAT GCGGGCTAAG CATGGATGAG CTGGCGGAAA TGGGGCTGAC GCTGGGCGCA
GATGTTCCTG TCTTTGTTCG GGGGCATGCC GCGTTTGCCG AAGGCGTTGG TGAAATACTA
ACCCCGGTGG ATCCGCCAGA GAAGTGGTAT CTGGTGGCGC ACCCTGGTGT AAGTATTCCG
ACTCCGGTGA TTTTTAAAGA TCCTGAACTC CCGCGCAATA CGCCAAAAAG GTCAATAGAA
ACGTTGCTAA AATGTGAATT CAGCAATGAT TGCGAGGTTA TCGCAAGAAA ACGTTTTCGC
GAGGTTGATG CGGTGCTTTC CTGGCTGTTA GAATACGCCC CGTCGCGCCT GACTGGGACA
GGGGCCTGTG TCTTTGCTGA ATTTGATACA GAGTCTGAAG CCCGCCAGGT GCTAGAGCAA
GCCCCGGAAT GGCTCAATGG CTTTGTGGCG AAAGGCGCTA ATCTTTCCCC ATTGCACAGA
GCCATGCTTT AA
 
Protein sequence
MRTQWPSPAK LNLFLYITGQ RADGYHTLQT LFQFLDYGDT ISIELRDDGD IRLLTPVEGV 
EHEDNLIVRA ARLLMKTAAD SGRLPTGSGA NISIDKRLPM GGGLGGGSSN AATVLVALNH
LWQCGLSMDE LAEMGLTLGA DVPVFVRGHA AFAEGVGEIL TPVDPPEKWY LVAHPGVSIP
TPVIFKDPEL PRNTPKRSIE TLLKCEFSND CEVIARKRFR EVDAVLSWLL EYAPSRLTGT
GACVFAEFDT ESEARQVLEQ APEWLNGFVA KGANLSPLHR AML