Gene ECH74115_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1655 
Symbol 
ID6966928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1599300 
End bp1599884 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content44% 
IMG OID643385615 
Producthelix-turn-helix domain protein 
Protein accessionYP_002270109 
Protein GI209396624 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.52652e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA GAGCTAAAAA TCAGATAGTC GATAGCGATA TTGCACGTTT GTTACTCAAG 
CTCAGAAAGT CTCGAAACTT GACTGTTACA GAGCTTGCCC AACGATCTGG TGTCAGTCAG
GCGATGATCA GCAAAGTTGA ACGAGGCACT TCAAGCCCCA GTGCAACAAT ACTTAGTCGG
TTAGCTAATG CACTGAATAT TACGCTATCA AAGCTTTTTG CAGAGCTTGA GATGCAACAG
AATTCACTTG TACTTTTGGC TGACCAGCAA CAACATTGGA TTGATGAAGA AACAGGCATT
ACCCGCTGGT CTTTGTCCCC AGCGGGTGCA TGTCCGGAAC TAATAAAAGT TGAAATCCCC
CCTATGGGGC AATTGACTAT CCCTGCCTCT GCAAATGAGC ATCTTTCTGG ACAAACTCTA
TGGATGTTAA GCGGCAGCCT TGATTTTCGA GTCAATCATC AGACTCATCA TTTACAAGCC
GGTGATTGTC TTGCTCTTAC CTTTGCCAGC GAGTACCAAA TGAGAAACCC AGATAGCGGC
CAGAGTTGTT CTTACATTGT CGCTTTCAGC CAAAAAAATC CATGA
 
Protein sequence
MDKRAKNQIV DSDIARLLLK LRKSRNLTVT ELAQRSGVSQ AMISKVERGT SSPSATILSR 
LANALNITLS KLFAELEMQQ NSLVLLADQQ QHWIDEETGI TRWSLSPAGA CPELIKVEIP
PMGQLTIPAS ANEHLSGQTL WMLSGSLDFR VNHQTHHLQA GDCLALTFAS EYQMRNPDSG
QSCSYIVAFS QKNP