Gene ECH74115_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1600 
Symbol 
ID6967432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1556359 
End bp1557183 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content46% 
IMG OID643385562 
Productreplication protein O 
Protein accessionYP_002270056 
Protein GI209398683 
COG category 
COG ID 
TIGRFAM ID[TIGR01610] phage replication protein O, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000108341 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAGAA ATGCAGTATT GAATTTATCA ATTTTTCACC AGCTTCTGGT CTTTCTGGCT 
GTCATGCGCA AAACATATGG CTTTAATAAA AAACTGGATT GGGTTAGCAA CGAGCAACTT
TCCGAATTAA CCGGGATATT GCCGCACAAG TGTTCTGCTG CAAAAAGTGT TCTGGTAAAG
CGTGGGATTT TTATTCAGAG CGGGCGGAAT ACCGGCATTA ATAATGTGGT CAGTGAATGG
TCAACATTAC CCGAATCAGG TAAGAAAAAT AAAGTTTACC TGAAAGAGGT AAATTTACCT
GAATCAGGTA AAAAAAGTTT ACCCAAATCA GGTAAAGGCG TTTACCCGAA TCAGGTAAAC
ACAAAAGACA AACTAACAAA AGACAATATA AAACCTTTTT CGTCCGAGAA TTCTGGCGAA
TCCTCTGACC AACCAGAAAA CGATCTTCCT GTGGTGAAAC CGGATGCTGC AATTCAGAGC
GGCAGCAAGT GGGGGACAGC AGAAGACCTG ACCGCCGCAG AGTGGATGTT TGACATGGTG
AAGACCATCG CGCCATCAGC CAGAAAACCG AATTTTGCAG GGTGGGCTAA CGATATCCGC
CTGATGCGTG AACGTGACGG ACGTAACCAC CGCGACATGT GCGTGCTGTT CCGCTGGGCA
TGCCAGGACA ACTTCTGGTC CGGTAACGTG CTAAGTCCGG CCAAACTCCG CGACAAGTGG
ACCCAGCTCG AAATCAACCG TAACAAGCAA CAGGCAGGCA TGATAGCCAG CAAACCAAAA
CTCGACCTGA CAAACACTGA CTGGATTTAC GGGGTGGATT TATGA
 
Protein sequence
MLRNAVLNLS IFHQLLVFLA VMRKTYGFNK KLDWVSNEQL SELTGILPHK CSAAKSVLVK 
RGIFIQSGRN TGINNVVSEW STLPESGKKN KVYLKEVNLP ESGKKSLPKS GKGVYPNQVN
TKDKLTKDNI KPFSSENSGE SSDQPENDLP VVKPDAAIQS GSKWGTAEDL TAAEWMFDMV
KTIAPSARKP NFAGWANDIR LMRERDGRNH RDMCVLFRWA CQDNFWSGNV LSPAKLRDKW
TQLEINRNKQ QAGMIASKPK LDLTNTDWIY GVDL