Gene ECH74115_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1567 
SymbolpotA 
ID6971381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1531648 
End bp1532784 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content51% 
IMG OID643385532 
Productputrescine/spermidine ABC transporter ATPase protein 
Protein accessionYP_002270026 
Protein GI209400971 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00000366035 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGACAGA GTAAAAAATT GAATAAACAA CCGAGTTCGC TTTCACCGCT GGTGCAATTG 
GCGGGAATTC GCAAATGCTT TGATGGTAAA GAGGTCATTC CCCAGCTGGA TCTGACTATC
AACAATGGCG AGTTCCTCAC GCTGCTTGGC CCTTCTGGCT GCGGTAAAAC AACCGTTCTT
CGCCTGATTG CAGGTCTGGA AACTGTTGAT TCCGGACGCA TCATGTTGGA TAACGAGGAC
ATCACCCACG TTCCGGCGGA AAACCGCTAT GTGAACACTG TTTTCCAAAG CTACGCACTT
TTCCCCCACA TGACCGTGTT CGAAAATGTG GCCTTTGGGT TGCGCATGCA AAAAACCCCC
GCTGCTGAAA TTACGCCCCG CGTGATGGAA GCCCTGCGGA TGGTGCAGCT GGAAACCTTC
GCTCAACGTA AACCGCATCA GCTCTCTGGT GGTCAACAGC AACGCGTCGC CATTGCTCGC
GCGGTGGTTA ACAAGCCTCG TCTGTTGTTG CTGGATGAGT CGCTCTCAGC GCTGGATTAC
AAACTGCGTA AGCAAATGCA GAACGAGCTG AAAGCGTTAC AGCGTAAGCT TGGCATTACA
TTCGTCTTCG TGACTCACGA TCAGGAAGAA GCACTCACCA TGTCAGACAG GATTGTGGTG
ATGCGCGATG GTCGCATTGA GCAAGACGGC ACGCCGCGTG AAATCTACGA AGAGCCGAAA
AACCTGTTTG TTGCCGGGTT CATTGGCGAA ATCAATATGT TTAACGCCAC TGTCATCGAA
CGTCTCGACG AGCAGCGCGT ACGCGCCAAC GTTGAAGGCC GCGAATGTAA TATCTACGTT
AACTTCGCCG TTGAACCGGG GCAAAAACTG CATGTTCTGC TGCGCCCGGA AGACTTACGT
GTTGAAGAGA TTAACGACGA CAACCACGCT GAAGGGCTGA TTGGTTACGT TCGCGAGCGT
AACTACAAAG GCATGACGCT GGAGTCGGTT GTTGAACTGG AAAATGGCAA GATGGTGATG
GTCAGCGAAT TCTTCAATGA AGACGATCCT GACTTTGACC ACTCTCTCGA CCAAAAAATG
GCCATTAATT GGGTAGAAAG CTGGGAGGTC GTACTGGCTG ATGAAGAACA CAAGTAA
 
Protein sequence
MGQSKKLNKQ PSSLSPLVQL AGIRKCFDGK EVIPQLDLTI NNGEFLTLLG PSGCGKTTVL 
RLIAGLETVD SGRIMLDNED ITHVPAENRY VNTVFQSYAL FPHMTVFENV AFGLRMQKTP
AAEITPRVME ALRMVQLETF AQRKPHQLSG GQQQRVAIAR AVVNKPRLLL LDESLSALDY
KLRKQMQNEL KALQRKLGIT FVFVTHDQEE ALTMSDRIVV MRDGRIEQDG TPREIYEEPK
NLFVAGFIGE INMFNATVIE RLDEQRVRAN VEGRECNIYV NFAVEPGQKL HVLLRPEDLR
VEEINDDNHA EGLIGYVRER NYKGMTLESV VELENGKMVM VSEFFNEDDP DFDHSLDQKM
AINWVESWEV VLADEEHK