| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1566 |
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| Symbol | potB |
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| ID | 6971408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1530801 |
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| End bp | 1531664 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643385531 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_002270025 |
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| Protein GI | 209400194 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00000236366 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAACA CAAGTAAGTT CCAGAATGTA GTGATTGTCA CTATTGTCGG TTGGCTTGTG
TTGTTTGTCT TTCTGCCCAA CCTGATGATC ATTGGCACCA GCTTTTTGGC CCGCGACGAC
GCCAGTTTTG TCAAAATGGT CTTTACGCTG GATAACTACA CACGTCTGCT CGATCCGCTC
TATTTTGAAG TGCTATTGCA CTCGCTGAAT ATGGCGCTGA TCGCCACCCT CGCCTGCCTG
GTGCTGGGCT ATCCGTTTGC CTGGTTTCTG GCGAAGCTGC CACACAAGGT GCGTCCGCTG
CTGCTGTTTC TGCTGATTGT TCCCTTCTGG ACCAACTCAC TGATTCGCAT CTACGGGCTG
AAAATTTTCC TCAGCACCAA AGGCTATCTC AACGAGTTTT TGCTCTGGCT GGGCGTTATC
GACACACCAA TTCGTATCAT GTTCACGCCC AGTGCGGTGA TTATCGGTCT GGTTTACATT
CTGCTACCGT TTATGGTGAT GCCGCTGTAC TCCAGTATCG AAAAACTGGA TAAGCCGTTG
CTTGAGGCGG CGCGCGATCT CGGTGCCAGC AAGTTACAGA CTTTTATCCG CATCATTATT
CCACTGACGA TGCCGGGGAT TATTGCCGGA TGTCTGCTGG TGATGCTGCC AGCGATGGGC
CTGTTCTATG TGTCCGACCT GATGGGCGGT GCGAAAAACC TGCTGATCGG TAACGTCATC
AAGGTACAGT TCCTCAATAT TCGTGACTGG CCGTTTGGTG CAGCCACCAG CATTACGCTG
ACTATCGTAA TGGGCCTGAT GTTGCTGGTT TACTGGCGCG CTTCTCGTCT GCTGAATAAG
AAGGCAACAG AAATAGATAA TTAG
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| Protein sequence | MKNTSKFQNV VIVTIVGWLV LFVFLPNLMI IGTSFLARDD ASFVKMVFTL DNYTRLLDPL
YFEVLLHSLN MALIATLACL VLGYPFAWFL AKLPHKVRPL LLFLLIVPFW TNSLIRIYGL
KIFLSTKGYL NEFLLWLGVI DTPIRIMFTP SAVIIGLVYI LLPFMVMPLY SSIEKLDKPL
LEAARDLGAS KLQTFIRIII PLTMPGIIAG CLLVMLPAMG LFYVSDLMGG AKNLLIGNVI
KVQFLNIRDW PFGAATSITL TIVMGLMLLV YWRASRLLNK KATEIDN
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