| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1441 |
|---|
| Symbol | pyrC |
|---|
| ID | 6969193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1424291 |
|---|
| End bp | 1425337 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643385414 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_002269908 |
|---|
| Protein GI | 209397912 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0418] Dihydroorotase |
|---|
| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.426148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.0213207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAC CATCCCAGGT ATTAAAGATC CGCCGCCCAG ACGACTGGCA CCTTCACCTC
CGCGATGGCG ACATGTTAAA AACTGTCGTG CCGTATACCA GCGAAATTTA TGGACGGGCT
ATCGTAATGC CCAATCTGGC TCCGCCCGTG ACCACCGTTG AGGCTGCCGT GGCGTATCGC
CAACGTATTC TTCACGCCGT ACCTGCCGGG CACGATTTCA CCCCATTGAT GACCTGTTAT
TTAACAGATT CGCTGGATCC TAATGAGCTG GAGCGCGGAT TTAACGAAGG CGTGTTCACC
GCTGCAAAAC TTTACCCGGC AAACGCAACC ACTAACTCCA GCCACGGCGT GACGTCAGTT
GACGCAATCA TGCCGGTATT AGAGCGCATG GAAAAAATCG GTATGCCGCT ACTGGTGCAT
GGTGAAGTGA CACATGCAGA TATCGACATT TTTGATCGTG AAGCGCGCTT TATAGAAAGC
GTGATGGAAC CTCTGCGCCA GCGCCTGACC GCGCTGAAAG TCGTTTTTGA GCACATCACC
ACCAAAGACG CAGCCGACTA TGTCCGTGAC GGAAATGAAC GGCTGGCTGC TACCATCACT
CCGCAACATC TGATGTTTAA CCGCAACCAT ATGCTGGTTG GTGGCGTGCG TCCGCACCTG
TATTGTCTAC CCATCCTCAA ACGCAATATT CACCAACAGG CATTGCGTGA ACTAGTCGCC
AGCGGTTTTA ATCGAGTATT CCTCGGTACG GATTCTGCGC CACATGCACG TCATCGCAAA
GAGAGCAGCT GCGGCTGCGC GGGCTGCTTC AACGCCCCAA CCGCGCTGGG AAGTTACGCT
ACCGTCTTTG AAGAGATGAA TGCTCTGCAG CACTTTGAAG CATTCTGTTC TGTAAACGGC
CCGCAGTTCT ATGGGTTACC GGTCAACGAC ACATTCATCG AACTGGTACG TGAAGAGCAT
CAGGTTGCTG AAAGCATCGC ACTGACTGAT GACACGCTGG TGCCATTCCT CGCCGGGGAA
ACGGTACGCT GGTCTGTTAA ACAATAA
|
|---|
| Protein sequence | MTAPSQVLKI RRPDDWHLHL RDGDMLKTVV PYTSEIYGRA IVMPNLAPPV TTVEAAVAYR
QRILHAVPAG HDFTPLMTCY LTDSLDPNEL ERGFNEGVFT AAKLYPANAT TNSSHGVTSV
DAIMPVLERM EKIGMPLLVH GEVTHADIDI FDREARFIES VMEPLRQRLT ALKVVFEHIT
TKDAADYVRD GNERLAATIT PQHLMFNRNH MLVGGVRPHL YCLPILKRNI HQQALRELVA
SGFNRVFLGT DSAPHARHRK ESSCGCAGCF NAPTALGSYA TVFEEMNALQ HFEAFCSVNG
PQFYGLPVND TFIELVREEH QVAESIALTD DTLVPFLAGE TVRWSVKQ
|
|---|
| |