| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1436 |
|---|
| Symbol | |
|---|
| ID | 6970643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1421207 |
|---|
| End bp | 1421773 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643385409 |
|---|
| Product | nickel-dependent hydrogenase b-type cytochrome subunit |
|---|
| Protein accession | YP_002269903 |
|---|
| Protein GI | 209398357 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.887549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.160518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTCA CAAATACCCC TGAACGCTAT GGTGTTATAT CTGCGGCCTT CCATTGGCTA
AGCGCAATTA TTGTCTACGG CATGTTTGCT TTAGGTCTGT GGATGGTCAC GCTCAGTTAT
TACGATGGCT GGTATCACAA AGCACCCGAA CTACATAAAA GCATCGGTAT TTTGTTAATG
ATGGGGCTGG TTATTCGCGT TCTGTGGCGT GTCATATCTC CACCGCCGGG TCCGCTGCCG
AGTTATTCGC CCATGACTCG TCTTGCCGCA AAAGCTGGAC ATCTCGCATT GTACCTATTG
CTGTTCGCCA TCGGCATCAG CGGCTATCTG ATCTCAACTG CCGATGGTAA ACCGATCAGC
GTTTTTGGCT GGTTTGACGT CCCCGCGACC CTTGCCGACG CTGGCGCACA GGCAGACTTT
GCCGGTGCCC TGCATTTTTG GCTCGCGTGG AGCGTCGTAG TACTGTCCGT TATGCACGGA
TTTATGGCCC TGAAGCATCA TTTCATCGAT AAAGACGACA CTCTGAAGCG CATGCTGGGA
AAGTCGTCAT CTGACTATGG AGTATAA
|
|---|
| Protein sequence | MSFTNTPERY GVISAAFHWL SAIIVYGMFA LGLWMVTLSY YDGWYHKAPE LHKSIGILLM
MGLVIRVLWR VISPPPGPLP SYSPMTRLAA KAGHLALYLL LFAIGISGYL ISTADGKPIS
VFGWFDVPAT LADAGAQADF AGALHFWLAW SVVVLSVMHG FMALKHHFID KDDTLKRMLG
KSSSDYGV
|
|---|
| |