Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1416 |
Symbol | csgG |
ID | 6970720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1403577 |
End bp | 1404410 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643385390 |
Product | curli production assembly/transport subunit CsgG |
Protein accession | YP_002269884 |
Protein GI | 209396137 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.0591449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCT TATTTCTTTT GGTTGCCGTC ATGTTACTGA GCGGATGCTT AACCGCCCCG CCTAAAGAAG CCGCCAGACC GACATTAATG CCTCGTGCTC AGAGCTACAA AGATTTGACC CATCTGCCAG CGCCGACGGG TAAGATCTTT GTTTCGGTAT ACAACATTCA GGACGAAACC GGGCAATTTA AACCCTACCC GGCAAGTAAC TTCTCCACTG CTGTTACGCA AAGCGCCACG GCGATGCTGG TCACGGCATT GAAAGATTCT CGCTGGTTTA TACCGCTGGA GCGCCAGGGC TTACAAAACC TGCTTAATGA GCGCAAGATT ATTCGTGCGG CACAAGAAAA CGGCACGGTT GCCATTAATA ACCGAATCCC GCTGCAATCT TTAACTGCGG CAAATATCAT GGTTGAAGGT TCGATTATCG GTTATGAAAG CAATGTCAAA TCTGGCGGGG TTGGGGCAAG ATATTTTGGG ATCGGTGCCG ACACGCAATA CCAGCTCGAT CAGATTGCCG TGAACCTGCG CGTCGTCAAT GTGAGTACCG GTGAGATCCT CTCCTCGGTG AACACCAGTA AGACGATACT TTCCTATGAA GTTCAGGCCG GGGTTTTCCG CTTTATTGAC TACCAGCGCT TGCTGGAAGG GGAAGTGGGT TACACCTCGA ACGAACCCGT TATGCTGTGC CTGATGTCGG CTATCGAAAC AGGGGTCATT TTCCTGATTA ATGATGGTAT TGACCGTGGT CTGTGGGATT TGCAGAACAA AGCAGAACGG CAGAATGACA TTCTGGTGAA ATACCGCCAT ATGTCGGTTC CACCGGAATC CTGA
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Protein sequence | MQRLFLLVAV MLLSGCLTAP PKEAARPTLM PRAQSYKDLT HLPAPTGKIF VSVYNIQDET GQFKPYPASN FSTAVTQSAT AMLVTALKDS RWFIPLERQG LQNLLNERKI IRAAQENGTV AINNRIPLQS LTAANIMVEG SIIGYESNVK SGGVGARYFG IGADTQYQLD QIAVNLRVVN VSTGEILSSV NTSKTILSYE VQAGVFRFID YQRLLEGEVG YTSNEPVMLC LMSAIETGVI FLINDGIDRG LWDLQNKAER QNDILVKYRH MSVPPES
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