Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1282 |
Symbol | |
ID | 6970961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1296108 |
End bp | 1297727 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643385270 |
Product | hemolysin activator-related protein |
Protein accession | YP_002269765 |
Protein GI | 209397617 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.395972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTAC GATTTAATTT TGGTTTGCTG CTCATTCTTT GTTGTTTTCA GGTTGCAGCG AAAGACAGTC TTGATAATTT GATCAAGCAG CAAAAAAATG CAGATGAAAG CACGTTGCGC GCGCATAAAT TAGAAAAAAA AGATGTTTAC TCAAATGCAC AACGTAATGC GTTTACTCTG GGTGATCTGC CGCAGGAAAA GAATTGCTTT ATCATTAATC GGATTGAACT GGAAGATAAC TTTCTGGGTG GTCAGTTGAT TTCTGAAGTG CAAAAAGCGA TTGCCGGACG TTGTGTCGGT AGTGCTGGTG TGCAAAAAAT TGCAGCTGCC TTGCAGGATT ATTATATTAA TGCGGGATAT ATCACAACGC GAATTAGTAT CCCTTCGCAG GATATTTCTA AAGGCAAGCT ACGTTTCCAG GTTAATGCCG GGAAGATAGA AAAAACGATT GTCGAAGGTA ATGATATCAG TGAATGGATG TTACCTTTTC AGCGTAACGA TATTCTCAAT ATTCGTGATA TTGAACAGGG GCTGGAAAAT CTTCAGCGAG TACCTGACGT TGATGTGAAA ATTAATATTG AACCGGGAAC ACGGGATGGT TACAGCATCG TTCATATTGA TACACACCGG GGGAAAAACT GGAGCGTTCG GGCAAGTTAC AACAATTGGG GCGATGAAGA AACGGGCCGT TACCAGACAA CCTCGGTGGG TTATCTGTTT AATCCAGCGA AAATGGGGGA TCTGTTTTAT CTCGCCGGTA CGCGTAGTAC TACCGGACAG TATGAAAACG TCAGTAGTTA TTATTCCATT CCGGTGGGGT ACTGGGAGTA CGGCTTTTTC TATAGCAAAA GTAAATCGCA GCAGGTGATT CCGCTTTCGT ACATCTCGCT GGATTATGTT GGCATCAGCG AATACTTGAG CGCAAAAGCG ACGCATACCG TTTATCGCGA TAAAACAAAA AAGTTCGCCG GTAGTGCAGA ACTCATTCGA CGAAAGTCGA ATTACACGCT TAATGGTGAG GAGCTGACAT TACAGGCGCG GGATATGGGA AATATCAAGC TGGGGCTAAA TTATAAGCAA CAGTTACCCG GCGCGTTCTG GGATTCAACC CTCTCGTGGC AACGCTTTTT AACCTGGTTC GGTGGTGAAA AAACGCCGGA TATGCAATAT GGCGACGTTA GCCCGGTAAG CAATATCTTT AATTTTGAGG GTAACTATAC CCGACAAATA GAGAATGGAT ATTACAATAC CGCTTTTTTT GCCCAGTACG CACCGCGTGA ACTGACTTTG CAAGATAAAA TTACAGTTGG CGATCGTTGG AGTATTCGCG GGTTTGAAAA TAGCGTAGGT TTGTCAGGGA ATGATGGTTT TTATATAAAA AATACGCTGG CATTTCCTTT GCCTGGAATG AAAGCTAATT ATTATGCCGG TCTTGATTTT GGGCAAGTGT ATCAGGACGC TTCTTATGGC GATGAATCAC TGGTGGGCTC GGCAGTTGGT ATTGATGGAA ACATTAAAAG TCTTGAGTAT AACTTTTCCG TTTCTACCCC ATTAAAGTAT CCGGCGACAT TAGATATTGA TCGGGTGAAT GTAAATTTTA ATTTTTCGTA CCAAATGTAA
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Protein sequence | MQLRFNFGLL LILCCFQVAA KDSLDNLIKQ QKNADESTLR AHKLEKKDVY SNAQRNAFTL GDLPQEKNCF IINRIELEDN FLGGQLISEV QKAIAGRCVG SAGVQKIAAA LQDYYINAGY ITTRISIPSQ DISKGKLRFQ VNAGKIEKTI VEGNDISEWM LPFQRNDILN IRDIEQGLEN LQRVPDVDVK INIEPGTRDG YSIVHIDTHR GKNWSVRASY NNWGDEETGR YQTTSVGYLF NPAKMGDLFY LAGTRSTTGQ YENVSSYYSI PVGYWEYGFF YSKSKSQQVI PLSYISLDYV GISEYLSAKA THTVYRDKTK KFAGSAELIR RKSNYTLNGE ELTLQARDMG NIKLGLNYKQ QLPGAFWDST LSWQRFLTWF GGEKTPDMQY GDVSPVSNIF NFEGNYTRQI ENGYYNTAFF AQYAPRELTL QDKITVGDRW SIRGFENSVG LSGNDGFYIK NTLAFPLPGM KANYYAGLDF GQVYQDASYG DESLVGSAVG IDGNIKSLEY NFSVSTPLKY PATLDIDRVN VNFNFSYQM
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