| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1236 |
|---|
| Symbol | cbpA |
|---|
| ID | 6969876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1246243 |
|---|
| End bp | 1247163 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643385231 |
|---|
| Product | curved DNA-binding protein CbpA |
|---|
| Protein accession | YP_002269726 |
|---|
| Protein GI | 209398120 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.152819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA AGGATTATTA CGCCATCATG GGCGTGAAAC CGACGGACGA TCTCAAGACA
ATCAAGACCG CCTATCGTCG ACTTGCCCGC AAATACCATC CTGATGTCAG CAAAGAACCG
GATGCCGAAG CCCGCTTCAA AGAGGTCGCT GAAGCCTGGG AAGTGTTAAG TGATGAACAA
CGTCGCGCTG AGTATGATCA GATGTGGCAA CATCGCAACG ATCCGCAATT TAGCCGTCAG
TTCCAGCATG GCGACGGTCA GAGTTTTAAC GCCGAAGATT TTGACGATAT CTTCTCGTCA
ATTTTCGGTC AGCATGCCCG CCAGAGCCGT CAACGCCCCG CCGCACGCGG CCACGATATT
GAAATCGAAG TGGCGGTATT CCTCGAAGAA ACGCTTACTG AGCATAAGCG TACCATCAGC
TATAACCTGC CGGTTTATAA CGCCTTTGGC ATGATCGAAC AGGAAATCCC GAAAACGCTG
AATGTGAAGA TCCCGGCAGG CGTCGGCAAT GGTCAACGCA TCCGCCTGAA AGGCCAGGGG
ACGCCGGGCG AAAACGGCGG TCCAAATGGC GATTTGTGGC TGGTGATTCA TATTGCGCCA
CATCCGCTGT TTGATATTGT CGGCCAGGAT CTGGAAATTG TGGTGCCGGT TAGCCCGTGG
GAAGCGGCGC TGGGTGCTAA AGTCACCGTT CCAACACTGA AAGAAAGCAT TTTGCTGACT
ATCCCGCCTG GCAGCCAGGC CGGGCAACGA TTGCGCGTTA AAGGCAAAGG TCTGGTGAGC
AAAAAACAGA CCGGCGATCT GTATGCGGTA CTGAAAATCG TGATGCCGCC GAAACCGGAT
GAAAACACTG CCGCGCTGTG GCAGCAACTG GCAGACGCCC AGTCGTCTTT TGATCCACGT
AAAGATTGGG GGAAAGCATA A
|
|---|
| Protein sequence | MELKDYYAIM GVKPTDDLKT IKTAYRRLAR KYHPDVSKEP DAEARFKEVA EAWEVLSDEQ
RRAEYDQMWQ HRNDPQFSRQ FQHGDGQSFN AEDFDDIFSS IFGQHARQSR QRPAARGHDI
EIEVAVFLEE TLTEHKRTIS YNLPVYNAFG MIEQEIPKTL NVKIPAGVGN GQRIRLKGQG
TPGENGGPNG DLWLVIHIAP HPLFDIVGQD LEIVVPVSPW EAALGAKVTV PTLKESILLT
IPPGSQAGQR LRVKGKGLVS KKQTGDLYAV LKIVMPPKPD ENTAALWQQL ADAQSSFDPR
KDWGKA
|
|---|
| |