Gene ECH74115_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1224 
Symbol 
ID6971756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1234350 
End bp1234562 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content47% 
IMG OID643385219 
Productcold shock DNA-binding protein 
Protein accessionYP_002269714 
Protein GI209400788 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000222108 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGTA AAATGACAGG AATTGTCAAA ACCTTTGATC GCAAAAGCGG CAAAGGATTC 
ATTATCCCCT CCGACGGTCG TAAAGAAGTT CAGGTCCATA TTTCCGCATT CACTCCCCGC
GACGCAGAAG TGCTTATACC AGGATTACGC GTGGAATTTT GCCGCGTAAA TGGCCTGCGA
GGACCAACAG CGGCAAATGT TTATCTCTCT TAA
 
Protein sequence
MSRKMTGIVK TFDRKSGKGF IIPSDGRKEV QVHISAFTPR DAEVLIPGLR VEFCRVNGLR 
GPTAANVYLS