Gene ECH74115_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1116 
Symbol 
ID6970628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1147723 
End bp1148286 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content53% 
IMG OID643385122 
Productputative lipoprotein 
Protein accessionYP_002269621 
Protein GI209399733 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.2581e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT GGCTAGTGAC GATTGCAGCA CTGTGGCTGG CCGGATGCAG CTCCGGCGAA 
ATTAATAAAA ACTATTACCA GTTACCTGTG GTGCAGAGCG GTACACAAAG TACCGCCAGC
CAGGGCAATC GCCTGTTATG GGTAGAGCAG GTCGCTGTAC CTGACTATCT GGCGGGGAAT
GGTGTGGTTT ATCAAACCAG TGATGTGAAG TATGTGATTG CCAACAACAA CTTGTGGGCC
AGCCCGTTGG ATCAACAGTT GCGCAACACC CTGGTAGCCA ACCTGAGCAC GCAACTGCCC
GGCTGGGTGG TTGCCTCCCA GCCTCTGGGA AGCGCCCAGG ACACGCTCAA TGTTACCGTA
ACGGAGTTTA ACGGTCGCTA TGATGGCAAG GTCATTGTCA GTGGTGAGTG GCTGTTGAAC
CACCAGGGAC AACTGATCAA ACGTCCGTTC CGTCTGGAAG GAGTGCAAAC TCAGGATGGT
TACGATGAGA TGGTTAAAGT GCTGGCCGGT GTCTGGAGTC AGGAAGCCGC TTCTATTGCA
CAAGAGATAA AGCGTCTACC TTAA
 
Protein sequence
MKKWLVTIAA LWLAGCSSGE INKNYYQLPV VQSGTQSTAS QGNRLLWVEQ VAVPDYLAGN 
GVVYQTSDVK YVIANNNLWA SPLDQQLRNT LVANLSTQLP GWVVASQPLG SAQDTLNVTV
TEFNGRYDGK VIVSGEWLLN HQGQLIKRPF RLEGVQTQDG YDEMVKVLAG VWSQEAASIA
QEIKRLP