Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1091 |
Symbol | asnC |
ID | 6968823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1120412 |
End bp | 1121812 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643385103 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_002269602 |
Protein GI | 209397026 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000126096 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.367452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTTG TGCCTGTAGC CGACGTACTC CAGGGCCGCG TAGCCGTTGA CAGCGAAGTC ACCGTACGCG GATGGGTACG TACCCGCCGA GATTCAAAAG CTGGCATCTC CTTCCTCGCC GTTTATGACG GTTCCTGCTT TGATCCTGTA CAGGCTGTCA TCAATAATTC TCTGCCCAAT TACAATGAAG ACGTCCTGCG TCTGACCACC GGCTGCTCGG TCATTGTGAC GGGTAAAGTC GTGGCGTCGC CGGGCCAGGG GCAACAATTT GAAATTCAGA CCAGCAAGGT TGAAGTTGCT GGTTGGGTTG AAGATCCAGA CACTTACCCG ATGGCGGCAA AACGCCACAG CATTGAGTAT CTGCGTGAAG TCGCTCACCT GCGTCCGCGC ACAAACCTGA TTGGTGCCGT CGCGCGCGTT CGCCATACGC TGGCGCAGGC GCTGCATCGC TTCTTTAACG AGCAGGGATT CTTCTGGGTT TCAACGCCAC TGATTACTGC GTCTGATACC GAAGGGGCTG GCGAAATGTT CCGCGTTTCT ACGCTGGATC TGGAAAATCT GCCGCGTAAC GATCAGGGCA AAGTGGATTT CGACAAAGAC TTCTTTGGTA AAGAGTCTTT CCTGACCGTA TCTGGCCAGT TGAACGGCGA AACCTACGCT TGCGCATTAT CCAAAATTTA TACCTTCGGC CCGACTTTCC GTGCTGAAAA CTCCAACACC AGCCGTCACC TGGCGGAATT CTGGATGCTG GAGCCGGAAG TGGCGTTTGC TAACCTGAAC GATATCGCGG GTCTGGCTGA AGCCATGCTG AAATATGTCT TCAAAGCGGT TCTCGAAGAA CGCGCTGACG ACATGAAATT CTTCGCTGAA CGCGTAGATA AAGATGCCGT TTCACGTCTG GAACGCTTTA TTGAGGCCGA TTTCGCGCAG GTGGATTACA CCGAAGCAGT AACCATTCTC GAAAACTGCG GCAGGAAGTT TGAAAACCCG GTTTACTGGG GCGTCGATCT CTCTTCTGAG CATGAGCGTT ATCTGGCGGA AGAACACTTT AAAGCACCGG TAGTGGTTAA AAACTATCCG AAAGATATTA AAGCGTTCTA TATGCGCCTC AACGAAGACG GTAAAACCGT TGCGGCTATG GATGTTCTGG CTCCGGGCAT CGGTGAGATC ATTGGTGGCT CCCAGCGTGA AGAGCGTCTG GACGTGCTGG ACGAGCGTAT GCTGGAAATG GGCCTGAACA AAGAAGATTA CTGGTGGTAT CGCGATCTGC GTCGCTACGG TACTGTTCCG CATTCCGGTT TCGGTCTTGG TTTTGAACGC CTGATTGCTT ACGTAACTGG TGTGCAAAAC GTGCGTGATG TGATTCCGTT CCCACGAACT CCGCGTAACG CCAGCTTCTA A
|
Protein sequence | MSVVPVADVL QGRVAVDSEV TVRGWVRTRR DSKAGISFLA VYDGSCFDPV QAVINNSLPN YNEDVLRLTT GCSVIVTGKV VASPGQGQQF EIQTSKVEVA GWVEDPDTYP MAAKRHSIEY LREVAHLRPR TNLIGAVARV RHTLAQALHR FFNEQGFFWV STPLITASDT EGAGEMFRVS TLDLENLPRN DQGKVDFDKD FFGKESFLTV SGQLNGETYA CALSKIYTFG PTFRAENSNT SRHLAEFWML EPEVAFANLN DIAGLAEAML KYVFKAVLEE RADDMKFFAE RVDKDAVSRL ERFIEADFAQ VDYTEAVTIL ENCGRKFENP VYWGVDLSSE HERYLAEEHF KAPVVVKNYP KDIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDERMLEM GLNKEDYWWY RDLRRYGTVP HSGFGLGFER LIAYVTGVQN VRDVIPFPRT PRNASF
|
| |