| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1086 |
|---|
| Symbol | |
|---|
| ID | 6968180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1114057 |
|---|
| End bp | 1115892 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643385098 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002269597 |
|---|
| Protein GI | 209399966 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0169645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.732672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTGTG GTCGTCGGCT GTCGGCAATC AGTTTGTGCC TGGCCGTAAC ATTCGCTCCA
CTGTTCAATG CGCAGGCCGA TGAGCCTGAA GTAATCCCTG GCGACAGCCC GGTGGCTGTC
AGTGAACAGG GCGAGGCACT GCCGCAGGCG CAAGCCACGG CAATAATGGC GGGGATCCTG
CCATTGCCTG AAGGTGCGGC AGAAAAAGCC CGCACGCAAA TCGAATCTCA ATTACCCGCA
GGTTACAAGC CGGTTTATCT TAACCAGCTT CAACTGTTGT ATGCCGCACG CGATATGCAA
CCCATGTGGG AAAACCGTGA TGCTGTTAAA GCCTTCCAGC AACAGCTGGC AGAGGTGGCG
ATTGCCGGTT TCCAGCCGCA GTTTAATAAA TGGGTAGAGT TACTGACCGA TCCTGGTGTT
AACGGGATGG CACGCGACGT GGTGCTCTCT GATGCGATGA TGGGCTATCT CCATTTCATT
GCAAATATTC CGGTCAAAGG CACTCGCTGG CTATATAGCA GTAAACCTTA TGCGCTTGCA
ACGCCGCCGC TTTCGGTGAT TAACCAATGG CAGCAGGCGC TGGATAAAGG TCAATTGCCT
ACGTTTGTTG CAGGACTGGC ACCGCAGCAT CCGCAATATG CGGTGATGCA TGAATCGTTA
CTGGCCTTAC TCAGTGACAC CAAACCGTGG CCCCAACTGA CCGGCAAAGC AACGTTGCGC
CCAGGGCAGT GGAGTAACGA CGTACCGGCG TTGCGTGAAA TATTGCAACG CACAGGCATG
TTGGACGGGG GGCCGAAAAT TACTCTACCT GGCGATGACA CGCCAACTGA CGCGGTAGTC
AGCCCATCCG CTGTTACTGT TGAAACAGCA GAAACTAAGC CGATGGATAA GCAAACGACG
TCTCGTAGTA AACCTGCGCC TGCCGTTCGC GCCGCCTACG ATAATGAACT GGTGGAAGCC
GTTAAACGTT TTCAGGCATG GCAAGGATTG GGGGCAGATG GTGCTATTGG CCCGGCAACG
CGTGACTGGT TAAACGTAAC GCCCGCCCAG CGTGCTGGCG TGTTGGCTCT CAACATCCAG
CGATTGCGCT TGCTGCCAAC AGAGCTTTCT ACCGGGATCA TGGTTAACAT TCCGGCCTAT
TCGCTGGTCT ACTATCAGAA CGGCAATCAG GTGCTGGATT CGCGAGTCAT TGTCGGTCGC
CCCGATCGCA AAACGCCGAT GATGAGCAGT GCCCTTAACA ATGTAGTGGT AAACCCGCCG
TGGAACGTAC CTCCAACTCT GGCACGCAAA GATATTCTGC CGAAAGTGCG CAACGATCCG
GGATATCTCG AAAGCCATGG CTATACGGTG ATGCGCGGCT GGAACAGCAG AGAAGCGATT
GACCCATGGC AGGTTGACTG GTCTACAATC ACGGCCTCGA ATTTACCGTT TCGCTTCCAA
CAGGCTCCAG GCCCACGGAA CTCGCTGGGG CGCTATAAAT TCAATATGCC GAGTTCAGAG
GCCATTTATT TGCATGACAC GCCGAACCAC AATCTGTTCA AGCGTGATAC ACGCGCATTG
AGCTCAGGCT GTGTACGAGT GAATAAAGCT TCCGATCTGG CGAATATGCT GTTGCAGGAT
GCAGGCTGGA ATGACAAACG TATTTCTGAT GCGCTGAAGC AGGGTGATAC ACGTTACGTC
AATATTCGGC AGTCGATTCC GGTGAATCTC TACTACCTGA CGGCCTTTGT TGGTGCAGAT
GGTCGTACCC AGTATCGTAC AGATATTTAC AATTATGATC TGCCTGCGCG ATCCAGCTCG
CAAATCGTAT CGAAAGCGGA ACAATTAATC AGGTAA
|
|---|
| Protein sequence | MMCGRRLSAI SLCLAVTFAP LFNAQADEPE VIPGDSPVAV SEQGEALPQA QATAIMAGIL
PLPEGAAEKA RTQIESQLPA GYKPVYLNQL QLLYAARDMQ PMWENRDAVK AFQQQLAEVA
IAGFQPQFNK WVELLTDPGV NGMARDVVLS DAMMGYLHFI ANIPVKGTRW LYSSKPYALA
TPPLSVINQW QQALDKGQLP TFVAGLAPQH PQYAVMHESL LALLSDTKPW PQLTGKATLR
PGQWSNDVPA LREILQRTGM LDGGPKITLP GDDTPTDAVV SPSAVTVETA ETKPMDKQTT
SRSKPAPAVR AAYDNELVEA VKRFQAWQGL GADGAIGPAT RDWLNVTPAQ RAGVLALNIQ
RLRLLPTELS TGIMVNIPAY SLVYYQNGNQ VLDSRVIVGR PDRKTPMMSS ALNNVVVNPP
WNVPPTLARK DILPKVRNDP GYLESHGYTV MRGWNSREAI DPWQVDWSTI TASNLPFRFQ
QAPGPRNSLG RYKFNMPSSE AIYLHDTPNH NLFKRDTRAL SSGCVRVNKA SDLANMLLQD
AGWNDKRISD ALKQGDTRYV NIRQSIPVNL YYLTAFVGAD GRTQYRTDIY NYDLPARSSS
QIVSKAEQLI R
|
|---|
| |