Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1056 |
Symbol | dmsA |
ID | 6967513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1075427 |
End bp | 1077871 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643385068 |
Product | anaerobic dimethyl sulfoxide reductase, A subunit |
Protein accession | YP_002269567 |
Protein GI | 209400103 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA AAATCCCTGA TGCGGTATTG GCTGCTGAGG TGAGTCGCCG TGGTTTGGTA AAAACGACAG CGATCGGCGG CCTGGCAATG GCCAGCAGCG CATTAACATT ACCTTTTAGT CGGATTGCGC ACGCTGTCGA TAGCGCCATT CCAACAAAAT CAGGCGAAAA GGTTATCTGG AGCGCCTGTA CAGTTAACTG TGGTAGTCGC TGCCCGCTAC GTATGCACGT CGTGGACGGT GAAATCAAAT ATGTCGAAAC GGACAATACC GGCGATGACA ATTACGACGG CCTGCACCAG GTTCGCGCCT GCCTGCGTGG GCGTTCCATG CGTCGCCGTG TCTACAATCC GGACCGCCTG AAATATCCGA TGAAACGAGT CGGGGCGCGC GGTGAAGGCA AATTCGAGCG CATTAGCTGG GAAGAAGCCT ACGACATCAT CGCGACCAAT ATGCAGCGCC TGATCAAAGA GTACGGCAAC GAATCCATCT ATCTGAACTA TGGCACCGGT ACGCTGGGTG GCACCATGAC CCGCTCCTGG CCGCCGGGAA ATACCCTGGT CGCGCGGCTG ATGAACTGCT GCGGCGGCTA TCTGAACCAT TACGGCGACT ACTCCTCCGC GCAAATTGCG GAAGGTCTGA ACTATACCTA CGGCGGCTGG GCAGATGGCA ACAGCCCGTC GGATATCGAA AACAGTAAGC TGGTAGTGCT GTTTGGTAAT AACCCTGGCG AAACGCGAAT GAGTGGCGGT GGGGTGACTT ACTATCTTGA ACAGGCACGC CAGAAATCTA ATGCCCGCAT GATCATCATC GATCCGCGCT ATACCGACAC CGGTGCCGGG CGCGAAGATG AGTGGATCCC TATTCGTCCG GGAACAGATG CCGCACTGGT TAACGGTCTG GCGTACGTCA TGATCACTGA AAACCTGGTG GATCAGGCAT TCCTCGATAA ATATTGCGTT GGCTACGATG AGAAAACCCT GCCAGCCAGT GCGCCGAAAA ATGGCCACTA TAAAGCTTAT ATTCTGGGTG AAGGGCCAGA TGGCGTGGCT AAAACACCGG AATGGGCCTC GCAAATCACC GGTGTTCCGG CAGACAAAAT CATCAAACTG GCTCGTGAAA TCGGCAGTAC CAAACCGGCG TTTATCAGCC AGGGATGGGG CCCGCAGCGT CACGCTAACG GTGAAATCGC AACCCGTGCT ATCTCGATGC TGGCGATTCT GACCGGTAAC GTTGGTATTA ATGGAGGGAA CAGCGGCGCG CGTGAAGGTT CATACAGTTT ACCGTTTGTC CGTATGCCGA CCTTGGAAAA CCCGATCCAG ACCAGCATTT CGATGTTTAT GTGGACCGAT GCCATTGAAC GTGGCCCGGA AATGACGGCG CTACGTGATG GTGTGCGCGG GAAAGATAAG CTGGATGTGC CGATCAAAAT GATCTGGAAC TATGCCGGTA ACTGCCTGAT TAACCAGCAT TCTGAAATCA ACCGTACCCA TGAAATCCTT CAGGATGATA AGAAGTGCGA GCTGATTGTG GTTATCGACT GCCACATGAC CTCATCGGCG AAATATGCTG ACATCCTGCT GCCTGACTGC ACCGCTTCCG AACAGATGGA CTTTGCACTG GATGCATCCT GCGGGAATAT GTCTTACGTG ATTTTCAACG ATCAGGTGAT TAAACCGCGC TTTGAATGTA AGACCATCTA TGAAATGACC AGCGAACTGG CAAAACGTCT TGGCGTTGAG CAACAGTTTA CTGAAGGCCG TACCCAGGAA GAGTGGATGC GGCATCTGTA TGCCCAGTCG CGGGAAGCGA TTCCTGAACT GCCAACGTTT GAAGAGTTCC GCAAGCAGGG GATCTTTAAA AAGCGCGACC CACAAGGGCA TCACGTTGCT TATAAAGCCT TCCGTGAAGA TCCGCAGGCA AATCCACTGA CCACGCCATC GGGTAAAATT GAGATTTATT CGCAGGCGCT GGCTGACATT GCCGCTACCT GGGAATTGCC AGAAGGCGAT GTGATCGATC CACTGCCGAT CTACACGCCG GGCTTTGAAA GTTATCAGGA TCCGCTGAAC AAACAGTATC CGCTGCAGCT TACAGGTTTC CACTATAAAT CTCGCGTTCA CTCAACTTAC GGCAACGTTG ATGTGCTGAA AGCGGCTTGC CGTCAGGAAA TGTGGATCAA CCCGCTTGAT GCCCAAAAAC GCGGTATCCA CAACGGCGAT AAAGTCAGGA TCTTTAACGA TCGTGGTGAG GTTCATATTG AGGCGAAAGT GACGCCACGA ATGATGCCGG GTGTGGTCGC ACTGGGTGAA GGTGCCTGGT ATGACCCGGA TGCAAAACGT GTCGATAAGG GTGGTTGTAT TAACGTACTG ACCACTCAAC GTCCGTCTCC TCTCGCTAAG GGGAATCCGT CACATACAAA CCTTGTTCAG GTTGAAAAGG TGTAA
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Protein sequence | MKTKIPDAVL AAEVSRRGLV KTTAIGGLAM ASSALTLPFS RIAHAVDSAI PTKSGEKVIW SACTVNCGSR CPLRMHVVDG EIKYVETDNT GDDNYDGLHQ VRACLRGRSM RRRVYNPDRL KYPMKRVGAR GEGKFERISW EEAYDIIATN MQRLIKEYGN ESIYLNYGTG TLGGTMTRSW PPGNTLVARL MNCCGGYLNH YGDYSSAQIA EGLNYTYGGW ADGNSPSDIE NSKLVVLFGN NPGETRMSGG GVTYYLEQAR QKSNARMIII DPRYTDTGAG REDEWIPIRP GTDAALVNGL AYVMITENLV DQAFLDKYCV GYDEKTLPAS APKNGHYKAY ILGEGPDGVA KTPEWASQIT GVPADKIIKL AREIGSTKPA FISQGWGPQR HANGEIATRA ISMLAILTGN VGINGGNSGA REGSYSLPFV RMPTLENPIQ TSISMFMWTD AIERGPEMTA LRDGVRGKDK LDVPIKMIWN YAGNCLINQH SEINRTHEIL QDDKKCELIV VIDCHMTSSA KYADILLPDC TASEQMDFAL DASCGNMSYV IFNDQVIKPR FECKTIYEMT SELAKRLGVE QQFTEGRTQE EWMRHLYAQS REAIPELPTF EEFRKQGIFK KRDPQGHHVA YKAFREDPQA NPLTTPSGKI EIYSQALADI AATWELPEGD VIDPLPIYTP GFESYQDPLN KQYPLQLTGF HYKSRVHSTY GNVDVLKAAC RQEMWINPLD AQKRGIHNGD KVRIFNDRGE VHIEAKVTPR MMPGVVALGE GAWYDPDAKR VDKGGCINVL TTQRPSPLAK GNPSHTNLVQ VEKV
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