| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1049 |
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| Symbol | cydD |
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| ID | 6969908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1063629 |
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| End bp | 1065395 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643385061 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_002269560 |
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| Protein GI | 209400891 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0961899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAT CTCGTCAAAA AGAGTTAACC CGCTGGTTAA AACAGCAAAG CGTCATCTCC
CAACGTTGGC TGAATATTTC TCGTCTGCTG GGCTTTGTGA GCGGCATATT GATCATTGCC
CAGGCATGGT TCATGGCGCG AATTCTGCAA CATATGATTA TGGAGAATAT TCCCCGTGAA
GCCCTGCTGC TTCCCTTTAC GTTACTGGTT CTGACCTTTG TACTGCGCGC ATGGGTGGTC
TGGTTACGCG AACGGGTGGG TTATCACGCC GGGCAGCATA TCCGCTTTGC CATCCGCCGT
CAGGTTCTCG ACCGTCTGCA ACAAGCAGGG CCAGCGTGGA TTCAGGGTAA ACCTGCGGGG
AGCTGGGCGA CGCTGGTACT CGAGCAAATT GACGATATGC ATGATTACTA TGCACGCTAC
CTGCCGCAAA TGGCGCTGGC AGTGTCGGTG CCGTTGCTGA TTGTGGTGGC GATCTTCCCC
TCTAACTGGG CTGCGGCGCT CATTCTGCTG GGCACTGCAC CGTTAATTCC GTTGTTTATG
GCGCTGGTTG GGATGGGGGC TGCCGATGCT AACCGACGTA ACTTTCTCGC TCTTGCTCGC
TTAAGTGGGC ATTTCCTCGA TCGCCTGCGC GGCATGGAAA CATTGCGTAT TTTTGGTCGT
GGTGAAGCTG AAATTGAAAG TATTCGTTCT GCTTCGGAAG ATTTCCGCCA ACGGACAATG
GAAGTGCTAC GGCTGGCGTT TTTATCCTCC GGCATTCTCG AATTTTTTAC CTCGCTGTCA
ATTGCTCTGG TGGCGGTCTA CTTTGGTTTT TCCTATCTCG GCGAGCTGGA TTTTGGTCAC
TACGATACTG GCGTGACGCT GGCTGCGGGT TTTCTGGCCC TGATCCTTGC GCCAGAGTTT
TTCCAGCCAT TACGCGATCT CGGTACGTTT TATCATGCTA AAGCCCAGGC TGTTGGTGCA
GCTGACAGTC TGAAAACGTT TATGGAAACC CCGCTCGCCC ATCCGCAGCG CGGTGAGACG
GAATTAGCAT CAACCGATCC GCTGACCATT GAGGCCGAGG ATCTGTTTAT CACGTCGCCG
GAAGGTAAAA CGCTGGCCGG ACCGCTGAAC TTTACTTTGC CAGCAGGCCA ACGTGCAGTG
TTGGTTGGTC GCAGCGGTTC AGGTAAAAGC TCACTGCTGA ACGCGCTTTC TGGTTTTCTC
TCATATCAGG GATCATTACG AATCAACGGG ATAGAATTAC GCGATTTATC ACCAGAATCA
TGGCGTAAAC ATCTCTCCTG GGTTGGTCAA AACCCACAAT TACCGGCAGC AACATTACGG
GATAACGTAC TACTGGCGCG ACCTGATGCC AGCGAACAAG AATTACAAGC AGCGCTGGAT
AACGCCTGGG TCAGCGAGTT TCTACCGCTC CTGCCACAAG GCGTTGATAC GCCTGTTGGC
GACCAGGCTG CCCGCCTTTC CGTGGGGCAG GCGCAGCGCG TGGCGGTGGC CCGTGCGTTA
CTAAATCCCT GTTCGCTATT ACTGTTGGAT GAACCCGCTG CCAGCCTTGA TGCTCACAGT
GAACAGCGCG TAATGGAGGC GCTGAATGCC GCCTCTCTGC GCCAGACAAC GTTAATGGTC
ACCCACCAGT TAGAAGATCT TGCTGACTGG GATGTCATTT GGGTTATGCA GGATGGCCGG
ATTATTGAGC AAGGACGTTA CGCGGAATTA AGTGTGGCTG GTGGCCCATT CGCCACATTA
CTGGCCCATC GTCAGGAGGA GATTTAA
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| Protein sequence | MNKSRQKELT RWLKQQSVIS QRWLNISRLL GFVSGILIIA QAWFMARILQ HMIMENIPRE
ALLLPFTLLV LTFVLRAWVV WLRERVGYHA GQHIRFAIRR QVLDRLQQAG PAWIQGKPAG
SWATLVLEQI DDMHDYYARY LPQMALAVSV PLLIVVAIFP SNWAAALILL GTAPLIPLFM
ALVGMGAADA NRRNFLALAR LSGHFLDRLR GMETLRIFGR GEAEIESIRS ASEDFRQRTM
EVLRLAFLSS GILEFFTSLS IALVAVYFGF SYLGELDFGH YDTGVTLAAG FLALILAPEF
FQPLRDLGTF YHAKAQAVGA ADSLKTFMET PLAHPQRGET ELASTDPLTI EAEDLFITSP
EGKTLAGPLN FTLPAGQRAV LVGRSGSGKS SLLNALSGFL SYQGSLRING IELRDLSPES
WRKHLSWVGQ NPQLPAATLR DNVLLARPDA SEQELQAALD NAWVSEFLPL LPQGVDTPVG
DQAARLSVGQ AQRVAVARAL LNPCSLLLLD EPAASLDAHS EQRVMEALNA ASLRQTTLMV
THQLEDLADW DVIWVMQDGR IIEQGRYAEL SVAGGPFATL LAHRQEEI
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