| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1015 |
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| Symbol | rumB |
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| ID | 6968423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1027168 |
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| End bp | 1028295 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643385029 |
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| Product | 23S rRNA methyluridine methyltransferase |
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| Protein accession | YP_002269529 |
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| Protein GI | 209399215 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.502416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTGCG CACTTTACGA CGCGGGTCGC TGTCGTTCCT GTCAGTGGAT AACGCAGCCG
ATTCCAGAGC AACTCTCCGC TAAAACCGCC GATCTTAAAA ATCTGCTCGC CGACTTTCCG
GTTGAGGAAT GGTGCGCGCC GGTGTCAGGC CCGGAACAAG GGTTTCGTAA TAAAGCCAAA
ATGGTGGTGA GTGGTAGCGT TGAAAAACCA CTGCTCGGTA TGCTGCATCG CGACGGCACA
CCGGAAGACC TTTGTGACTG CCCGCTTTAT CCTGCCTCAT TTGCGCCCGT TTTTGCGGCG
CTAAAACCGT TTATCGCCCG AGCGGGGTTA ACGCCCTACA ACGTGGCGCG TAAGCGTGGC
GAACTGAAAT ACATTCTGCT GACTGAAAGC CAGAGCGATG GCGGCATGAT GCTGCGCTTT
GTACTGCGTT CTGAAACCAA ACTAGCACAA CTGCGTAAGG CATTGCCGTG GTTACAGGCA
CAATTGCCGC AGCTAAAAGT TATCACCGTC AATATTCAGC CGGTACATAT GGCGATTATG
GAAGGGGAGA CGGAGATCTA CCTGACCGAA CAACAGGCGC TGGTAGAGCG TTTTAACGAT
GTGCCGCTGT GGATCCGTCC GCAAAGTTTC TTCCAGACTA ATCCGGCGGT CGCCAGCCAG
CTGTACGCTA CCGCGCGCGA CTGGGTACGA CAGCTGCCGG TTAAACATAT GTGGGATCTG
TTCTGCGGTG TGGGGGGCTT TGGTTTACAC TGCGCGACGC CTGACATGCA GTTAACCGGG
ATCGAAATTG CGCTAGAGGC CATTGCCTGT GCAAAGCAGT CAGCCGCTGA ACTGGGCTTA
ACGCGTCTGC AATTTCAGGC GCTGGACTCC ACTCAGTTTG CCACCGCTCA GGGGGAGGTG
CCGGAGCTGG TGCTGGTTAA CCCGCCGCGC CGCGGCATTG GTAAACCGCT GTGTGATTAT
CTCTCAACGA TGGCACCGCG TTTTATTATC TACTCCAGCT GTAACGCCCA AACCATGGCG
AAAGATATCC GCGAACTGCC AGGTTACCGC ATCGAACGGG TACAGCTTTT TGATATGTTC
CCGCACACCG CGCACTATGA AGTGCTGACG CTGCTGGTAA AAATGTAA
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| Protein sequence | MQCALYDAGR CRSCQWITQP IPEQLSAKTA DLKNLLADFP VEEWCAPVSG PEQGFRNKAK
MVVSGSVEKP LLGMLHRDGT PEDLCDCPLY PASFAPVFAA LKPFIARAGL TPYNVARKRG
ELKYILLTES QSDGGMMLRF VLRSETKLAQ LRKALPWLQA QLPQLKVITV NIQPVHMAIM
EGETEIYLTE QQALVERFND VPLWIRPQSF FQTNPAVASQ LYATARDWVR QLPVKHMWDL
FCGVGGFGLH CATPDMQLTG IEIALEAIAC AKQSAAELGL TRLQFQALDS TQFATAQGEV
PELVLVNPPR RGIGKPLCDY LSTMAPRFII YSSCNAQTMA KDIRELPGYR IERVQLFDMF
PHTAHYEVLT LLVKM
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