Gene ECH74115_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0999 
Symbol 
ID6968856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1016073 
End bp1016609 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content51% 
IMG OID643385015 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002269515 
Protein GI209397291 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.252522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCG CTAACGATCC GCAACGGCGA GAAAAAATTA TCCAGGCCAC GCTGGAGGCG 
GTGAAACTTT ACGGAATACA TGCTGTTACG CACCGCAAAA TTGCTACCCT TGCCGGGGTA
CCGTTGGGAT CGATGACCTA CTATTTTTCA GGAATTGATG AGTTGTTGCT GGAGGCGTTC
AGCAGTTTTA CTGAGATCAT GTCCCGGCAA TATCAGGCAT TTTTTAGCGA TGTTAGTGAT
GCTCAAGGCG CATGCCAGGC TATCACCGAT ATGATCTACA GCTCACAGGT TGCAACGCCG
GATAACATGG AGCTGATGTA CCAGCTCTAC GCGCTGGCTA GCCGAAAACC GCTATTAAAA
ACGGTAATGC AAAACTGGAT GCAGCGCAGT CAGCAAACGC TCGAACAATG GTTTGAACCC
GGAACCGCCC GCGCGCTTGA TGCGTTTATT GAGGGGATGA CGCTGCATTT TGTCACCGAC
CGTAAGCCGC TATCGCGCGA GGAGATTTTG AGGATGGTTG AGAGGGTTGC AGGGTAG
 
Protein sequence
MRRANDPQRR EKIIQATLEA VKLYGIHAVT HRKIATLAGV PLGSMTYYFS GIDELLLEAF 
SSFTEIMSRQ YQAFFSDVSD AQGACQAITD MIYSSQVATP DNMELMYQLY ALASRKPLLK
TVMQNWMQRS QQTLEQWFEP GTARALDAFI EGMTLHFVTD RKPLSREEIL RMVERVAG