Gene ECH74115_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0943 
Symbol 
ID6969862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp954706 
End bp955701 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content57% 
IMG OID643384964 
Producthypothetical protein 
Protein accessionYP_002269464 
Protein GI209398015 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC CTGTCGTGAT CGGACTGGCG GTAGTGGTAC TTGCCGCCGT GGTTGCCGGA 
GGCTACTGGT GGTATCAAAG CCGCCAGGAT AACGGCCTGA CGCTGTATGG CAACGTGGAT
ATTCGTACGG TGAATCTTAG TTTCCGTGTT GGGGGGCGCG TTGAATCGCT GGCGGTGGAC
GAAGGTGATG CTATCAAAGC GGGCCAGGTG CTGGGCGAAC TGGATCACAA GCCGTATGAG
ATTGCCCTGA TGCAGGCGAA AGCGGGCGTC TCGGTGGCAC AGGCGCAGTA TGACCTGATG
CTTGCCGGGT ATCGCGATGA AGAAATCGCT CAGGCCGCCG CAGCGGTGAA ACAGGCGCAA
GCCGCCTATG ACTATGCGCA GAACTTCTAT AACCGCCAGC AAGGACTGTG GAAAAGCCGC
ACCATTTCGG CAAATGACCT GGAAAATGCC CGCTCCTCGC GCGACCAGGC ACAGGCAACG
CTGAAATCAG CACAGGATAA ATTGCGTCAG TACCGTTCCG GTAACCGTGA ACAGGACATC
GCTCAGGCGA AAGCCAGCCT CGAACAGGCG CAGGCGCAAC TGGCGCAGGC GGAGCTGAAT
TTACAGGACT CAACGTTGAT AGCACCGTCT GATGGCACGC TGTTAACGCG CGCGGTGGAG
CCAGGCACGG TTCTCAATGA AGGTGGCACG GTGTTTACCG TTTCACTAAC GCGTCCGGTG
TGGGTGCGTG CTTATGTTGA TGAACGGAAT CTTGACCAGG CCCAGCCGGG GCGCAAAGTG
CTGCTTTATA CCGATGGTCG CCCGGACAAG CCCTATCACG GGCAGATTGG TTTCGTTTCG
CCGACTGCTG AATTTACCCC GAAAACCGTC GAAACACCGG ATCTGCGTAC CGACCTCGTC
TATCGCCTGC GTATTGTGGT GACCGACGCC GATGATGCGT TACGCCAGGG AATGCCAGTG
ACGGTACAAT TCGGTGACGA GGCAGGACAT GAATGA
 
Protein sequence
MKKPVVIGLA VVVLAAVVAG GYWWYQSRQD NGLTLYGNVD IRTVNLSFRV GGRVESLAVD 
EGDAIKAGQV LGELDHKPYE IALMQAKAGV SVAQAQYDLM LAGYRDEEIA QAAAAVKQAQ
AAYDYAQNFY NRQQGLWKSR TISANDLENA RSSRDQAQAT LKSAQDKLRQ YRSGNREQDI
AQAKASLEQA QAQLAQAELN LQDSTLIAPS DGTLLTRAVE PGTVLNEGGT VFTVSLTRPV
WVRAYVDERN LDQAQPGRKV LLYTDGRPDK PYHGQIGFVS PTAEFTPKTV ETPDLRTDLV
YRLRIVVTDA DDALRQGMPV TVQFGDEAGH E