Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0871 |
Symbol | |
ID | 6968387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 886856 |
End bp | 887809 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643384896 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002269396 |
Protein GI | 209396612 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATG AATTATCAAG TATGAAGGCA TTTGTCATAC TGGCAGAGTC CAGTTCATTT AACAATGCCG CTAAATTACT CAATATTACG CAACCTGCAT TAACACGAAG AATAAAAAAG ATGGAGGAAG ATTTACATAT TCAACTATTT GAGCGTACAA CTCGCAAGGT TACGTTAACA AAAGCAGGAA AAAGGTTGCT CCCAGAGGCG CGGGAATTAA TAAAGAAATT CGATGAAACG CTTTTTAATA TTCGTGATAT GAATGCTTAT CATCGTGGTA TGGTGACGTT AGCGTGTATT CCGACCGCAG TATTTTATTT TTTACCGCTG GCAATCGGTA AATTTAATGA GCTGTATCCC AATATTAAAG TGCGGATTCT GGAACAAGGC ACGAATAATT GCATGGAATC GGTGCTGTGT AACGAATCAG ACTTTGGCAT AAACATGAAC AACGTCACAA ATTCATCCAT TGATTTTACC CCACTGGTCA ACGAGCCGTT CGTGCTGGCC TGTCGGCGTG ACCATCCATT GGCTAAAAAG CAGCTTGTAG AATGGCAGGA GTTAGTGGGT TACAAAATGA TTGGCGTACG TTCCTCCAGT GGCAACCGAT TGTTGATAGA ACAACAGCTA GCCGACAAGC CCTGGAAGCT GGACTGGTTT TACGAAGTGC GTCATCTTTC GACGTCATTA GGACTGGTAG AGGCGGGACT GGGAATTTCG GCGCTTCCTG GTCTGGCAAT GCCCCATGCG CCCTATTCTT CTATTATTGG TATCCCACTG GTGGAACCCG TTATACGTCG GACATTGGGG ATTATTCGCC GCAAAGATGC CGTGCTTTCT CCGGCAGCAG AACGCTTTTT TGCCTTGCTG ATTAATTTGT GGACTGACGA TAAAGACAAT TTGTGGACCA ATATCGTCGA ACGCCAGAGA CATGCGTTAC AGGAGATAGG TTAA
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Protein sequence | MKHELSSMKA FVILAESSSF NNAAKLLNIT QPALTRRIKK MEEDLHIQLF ERTTRKVTLT KAGKRLLPEA RELIKKFDET LFNIRDMNAY HRGMVTLACI PTAVFYFLPL AIGKFNELYP NIKVRILEQG TNNCMESVLC NESDFGINMN NVTNSSIDFT PLVNEPFVLA CRRDHPLAKK QLVEWQELVG YKMIGVRSSS GNRLLIEQQL ADKPWKLDWF YEVRHLSTSL GLVEAGLGIS ALPGLAMPHA PYSSIIGIPL VEPVIRRTLG IIRRKDAVLS PAAERFFALL INLWTDDKDN LWTNIVERQR HALQEIG
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