Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0835 |
Symbol | cydA |
ID | 6970114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 859235 |
End bp | 860803 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643384860 |
Product | cytochrome d ubiquinol oxidase, subunit I |
Protein accession | YP_002269366 |
Protein GI | 209397384 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0025291 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.492796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGATA TAGTCGAACT GTCGCGCTTA CAGTTTGCCT TGACCGCGAT GTACCACTTC CTTTTTGTGC CACTGACGCT CGGTATGGCG TTCCTGCTGG CCATTATGGA AACGGTCTAC GTCCTTTCCG GCAAACAGAT TTATAAAGAT ATGACCAAGT TCTGGGGCAA GTTGTTTGGT ATCAACTTCG CTCTGGGTGT GGCTACCGGT CTGACCATGG AGTTCCAGTT CGGGACTAAC TGGTCTTACT ATTCCCACTA TGTAGGGGAT ATCTTCGGTG CGCCGCTGGC AATCGAAGGT CTGATGGCCT TCTTCCTCGA ATCCACCTTT GTAGGTCTGT TCTTCTTCGG TTGGGATCGT CTGGGTAAAG TTCAGCATAT GTGTGTCACC TGGCTGGTGG CGCTCGGTTC AAACCTGTCC GCACTGTGGA TTCTGGTTGC GAACGGCTGG ATGCAAAACC CAATCGCGTC CGATTTCAAC TTTGAAACTA TGCGTATGGA GATGGTGAGC TTCTCCGAGC TGGTGCTTAA CCCGGTTGCT CAGGTGAAAT TCGTTCACAC TGTAGCGTCT GGTTATGTGA CTGGCGCGAT GTTCATCCTC GGTATCAGCG CATGGTATAT GCTGAAAGGT CGTGACTTCG CCTTCGCTAA ACGCTCCTTT GCTATCGCTG CCAGCTTCGG TATGGCTGCC GTTCTGTCTG TTATTGTTCT GGGTGATGAA TCCGGCTACG AAATGGGCGA CGTGCAGAAA ACCAAACTGG CTGCTATTGA AGCTGAGTGG GAAACGCAAC CTGCGCCTGC TGCCTTTACT CTGTTCGGCA TTCCTGATCA GGAAGAGGAG ACGAACAAAT TTGCGATCCA GATCCCTTAC GCGCTGGGCA TAATTGCAAC GCGTTCCGTG GATACTCCAG TTATCGGCCT GAAAGAACTG ATGGTGCAGC ATGAAGAACG CATTCGTAAC GGGATGAAGG CGTACTCTCT GCTCGAACAA CTGCGTTCTG GTTCTACCGA CCAGGCGGTT CGTGACCAGT TCAATAGCAT GAAGAAGGAC CTCGGTTACG GTCTGCTGCT GAAACGCTAT ACGCCAAACG TGGCTGATGC GACTGAAGCG CAGATTCAAC AGGCAACCAA AGACTCCATT CCGCGTGTAG CGCCGCTGTA CTTCGCGTTC CGTATCATGG TGGCGTGTGG CTTCCTGCTG CTGGCAATCA TCGCGCTCTC TTTCTGGAGT GTCATCCGCA ACCGCATTGG CGAGAAAAAA TGGCTCCTGC GCGCCGCGCT GTACGGTATT CCGCTGCCGT GGATTGCTGT AGAAGCGGGC TGGTTCGTGG CTGAATATGG CCGCCAACCG TGGGCTATCG GTGAAGTGCT GCCGACAGCT GTGGCGAACT CGTCACTGAC CGCAGGCGAT CTCATCTTCT CAATGGTGCT GATTTGCGGC CTGTATACCC TGTTCCTGGT GGCAGAATTG TTCTTAATGT TCAAGTTTGC ACGCCTCGGC CCAAGCAGCC TGAAAACCGG TCGCTATCAC TTTGAGCAGT CTTCCACGAC TACTCAGCCG GCACGCTAA
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Protein sequence | MLDIVELSRL QFALTAMYHF LFVPLTLGMA FLLAIMETVY VLSGKQIYKD MTKFWGKLFG INFALGVATG LTMEFQFGTN WSYYSHYVGD IFGAPLAIEG LMAFFLESTF VGLFFFGWDR LGKVQHMCVT WLVALGSNLS ALWILVANGW MQNPIASDFN FETMRMEMVS FSELVLNPVA QVKFVHTVAS GYVTGAMFIL GISAWYMLKG RDFAFAKRSF AIAASFGMAA VLSVIVLGDE SGYEMGDVQK TKLAAIEAEW ETQPAPAAFT LFGIPDQEEE TNKFAIQIPY ALGIIATRSV DTPVIGLKEL MVQHEERIRN GMKAYSLLEQ LRSGSTDQAV RDQFNSMKKD LGYGLLLKRY TPNVADATEA QIQQATKDSI PRVAPLYFAF RIMVACGFLL LAIIALSFWS VIRNRIGEKK WLLRAALYGI PLPWIAVEAG WFVAEYGRQP WAIGEVLPTA VANSSLTAGD LIFSMVLICG LYTLFLVAEL FLMFKFARLG PSSLKTGRYH FEQSSTTTQP AR
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