Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0788 |
Symbol | kdpD |
ID | 6969288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 803432 |
End bp | 806116 |
Gene Length | 2685 bp |
Protein Length | 894 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643384815 |
Product | sensor protein KdpD |
Protein accession | YP_002269321 |
Protein GI | 209397561 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACG AACCCTTACG TCCCGACCCC GATCGTCTGC TGGAACAAAC TGCCGCGCCG CATCGGGGGA AGCTGAAAGT TTTCTTCGGT GCCTGCGCAG GCGTCGGGAA GACCTGGGCG ATGCTGGCAG AAGCCCAGCG ACTGCGGGCG CAAGGGCTGG ATATTGTGGT TGGCGTGGTA GAAACCCACG GGCGGAAAGA TACCGCCGCC ATGCTGGAAG GGCTGGCTGT TCTGCCGCCA AAACGCCTGG CGTACCGTGG GCGGCACATC AGCGAGTTTG ATCTCGATGC CGCCCTCGCC CGCCGTCCGG CGCTGATCTT AATGGACGAA CTGGCGCACA GTAATGCGCC AGGTTCTCGT CATCCTAAAC GCTGGCAGGA TATCGAAGAA CTGCTGGAAG CTGGCATTGA TGTTTTCACA ACCGTCAACG TTCAGCATCT GGAAAGTCTG AATGATGTGG TCAGCGGCGT CACCGGAATT CAGGTACGGG AAACCGTGCC CGATCCTTTT TTCGATGCCG CCGACGACGT GGTGCTGGTG GACTTGCCCC CGGACGATCT GCGCCAGCGG CTGAAAGAAG GCAAAGTCTA TATTGCCGGG CAGGCGGAGC GCGCCATTGA ACATTTTTTC CGCAAAGGCA ATCTGATCGC CCTGCGCAAA CTGGCACTGC GCCGTACTGC CGATCGCGTT GATGAGCAAA TGCGCGCCTG GCGGGGGCAT CCTGGCGAAG AGAAAGTCTG GCACACGCGC GACGCGATCC TTTTATGCAT CGGCCATAAC ACCGGCAGCG AAAAACTGGT CCGCGCGGCG GCGCGGCTGG CGTCACGGCT GGGGAGCGTC TGGCACGCGG TGTATGTTGA AACCCCTGCC CTGCATCGCT TACCGGAGAA AAAACGTCGG GCAATTCTCA GCGCCTTACG TCTGGCGCAG GAGCTGGGCG CGGAGACGGC AACACTTTCT GATCCAGCGG AAGAGAAAGC GGTAGTGCGT TATGCCCGTG AACATAATCT CGGCAAGATT ATTCTCGGTC GCCCAGCCTC GCGCCGCTGG TGGCGTCGGG AAACGTTTGC TGACCGACTG GCGCGCATCG CCCCCGATCT CGATCAGGTG CTGGTCGCGC TTGATGAACC ACCCGCCCGC ACGATTAACA ACGCGCCGGA TAGCCGCTCT TTTAAAGACA AGTGGCGGGT ACAGATTCAG GGATGCGTGG TTGCCGCCGC GTTATGCGCC GTTATCACCT TAATTGCCAT GCAGTGGCTG ATGGCGTTTG ATGCCGCCAA CCTGGTGATG CTGTATCTAC TTGGCGTGGT GGTGGTGGCG CTATTTTATG GACGCTGGCC TTCGGTGGTT GCTACCGTCA TTAATGTGGT GAGTTTCGAT CTCTTTTTTA TCGCCCCACG CGGCACGCTC GCCGTCTCTG ATGTGCAATA TCTGCTGACC TTCGCGGTGA TGTTAACCGT CGGGCTGGTG ATCGGGAACC TTACTGCGGG TGTGCGTTAT CAGGCGCGGG TAGCCCGTTA CCGCGAGCAA CGCACACGGC ACTTATATGA AATGTCGAAA GCTCTGGCGG TGGGCCGCAG TCCGCAGGAC ATCGCCGCCA CCAGCGAACA ATTTATTGCC TCCACGTTTC ATGCCCGCAG TCAGGTGTTG TTGCCCGATG ACAACGGTAA ATTGCAGCCG TTAACACATC CGCAAGGAAT GACGCCGTGG GACGATGCCA TCGCGCAGTG GAGTTTTGAT AAAGGCCTGC CTGCGGGTGC GGGCACCGAC ACGTTACCCG GCGTGCCGTA CCAGATTTTG CCGTTAAAAA GCGGTGAGAA AACCTACGGG CTGGTGGTGG TGGAACCGGG GAATCTGCGT CAGTTGATGA TCCCGGAACA GCAGCGCCTG CTGGAGACGT TTACGCTGTT AGTCGCCAAT GCGCTTGAGC GGCTGACGCT GACCGCCAGC GAAGAACAGG CGCGGATGGC AAGCGAACGT GAACAGATCC GCAACGCCCT GCTGGCGGCG CTTTCGCATG ATTTACGCAC TCCGCTTACG GTGCTGTTTG GTCAGGCAGA AATCTTAACG CTCGATCTGG CAAGCGAAGG ATCACCCCAC GCCCGCCAGG CCAGCGAGAT TCGTCAGCAT GTGCTGAACA CTACCCGACT GGTGAATAAT CTACTGGATA TGGCGCGAAT TCAGTCCGGC GGCTTTAATT TGAAGAAAGA GTGGTTAACG CTGGAAGAAG TAGTCGGCAG CGCGCTGCAA ATGCTGGAAC CGGGTTTATC GTCGCCCATC AATCTTTCTC TGCCAGAACC GCTGACCTTA ATCCACGTTG ACGGGCCACT CTTTGAACGG GTGCTGATTA ATCTGCTGGA GAACGCGGTG AAATATGCGG GTGCGCAGGC CGAAATTGGT ATCGATGCCC ACGTTGAGGG CGAAAATCTA CAACTGGATG TCTGGGATAA CGGCCCCGGT CTTCCGCCAG GCCAGGAGCA GACGATATTT GATAAGTTTG CTCGCGGGAA TAAAGAGTCG GCAGTACCGG GGGTAGGGCT TGGACTGGCA ATTTGTCGGG CGATAGTGGA TGTACACGGG GGCACTATTA CCGCGTTCAA CCGGCCGGAA GGTGGTGCCT GTTTTCGTGT TACACTTCCC CAGCAAACTG CCCCTGAACT TGAAGAATTT CATGAGGATA TGTGA
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Protein sequence | MNNEPLRPDP DRLLEQTAAP HRGKLKVFFG ACAGVGKTWA MLAEAQRLRA QGLDIVVGVV ETHGRKDTAA MLEGLAVLPP KRLAYRGRHI SEFDLDAALA RRPALILMDE LAHSNAPGSR HPKRWQDIEE LLEAGIDVFT TVNVQHLESL NDVVSGVTGI QVRETVPDPF FDAADDVVLV DLPPDDLRQR LKEGKVYIAG QAERAIEHFF RKGNLIALRK LALRRTADRV DEQMRAWRGH PGEEKVWHTR DAILLCIGHN TGSEKLVRAA ARLASRLGSV WHAVYVETPA LHRLPEKKRR AILSALRLAQ ELGAETATLS DPAEEKAVVR YAREHNLGKI ILGRPASRRW WRRETFADRL ARIAPDLDQV LVALDEPPAR TINNAPDSRS FKDKWRVQIQ GCVVAAALCA VITLIAMQWL MAFDAANLVM LYLLGVVVVA LFYGRWPSVV ATVINVVSFD LFFIAPRGTL AVSDVQYLLT FAVMLTVGLV IGNLTAGVRY QARVARYREQ RTRHLYEMSK ALAVGRSPQD IAATSEQFIA STFHARSQVL LPDDNGKLQP LTHPQGMTPW DDAIAQWSFD KGLPAGAGTD TLPGVPYQIL PLKSGEKTYG LVVVEPGNLR QLMIPEQQRL LETFTLLVAN ALERLTLTAS EEQARMASER EQIRNALLAA LSHDLRTPLT VLFGQAEILT LDLASEGSPH ARQASEIRQH VLNTTRLVNN LLDMARIQSG GFNLKKEWLT LEEVVGSALQ MLEPGLSSPI NLSLPEPLTL IHVDGPLFER VLINLLENAV KYAGAQAEIG IDAHVEGENL QLDVWDNGPG LPPGQEQTIF DKFARGNKES AVPGVGLGLA ICRAIVDVHG GTITAFNRPE GGACFRVTLP QQTAPELEEF HEDM
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