Gene ECH74115_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0772 
SymbolnagE 
ID6968098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp787242 
End bp789188 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content55% 
IMG OID643384800 
ProductPTS system N-acetyl glucosamine specific transporter subunits IIABC 
Protein accessionYP_002269306 
Protein GI209398022 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.131412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT TAGGTTTTTT CCAGCGACTC GGTAGGGCGT TACAGCTCCC TATCGCGGTG 
CTGCCGGTGG CGGCACTGTT GCTGCGATTC GGTCAGCCAG ATTTACTTAA CGTTGCGTTT
ATTGCCCAGG CGGGCGGTGC GATTTTTGAT AACCTCGCAT TAATCTTCGC CATCGGTGTG
GCATCCAGCT GGTCGAAAGA CAGCGCAGGT GCGGCGGCGC TGGCGGGGGC GGTAGGTTAC
TTTGTGTTAA CCAAAGCGAT GGTGACCATC AACCCAGAAA TTAACATGGG TGTACTGGCG
GGTATCATTA CCGGTCTGGT TGGTGGCGCA GCCTATAACC GTTGGTCCGA TATTAAACTG
CCGGACTTCC TGAGCTTCTT CGGCGGCAAA CGCTTTGTGC CGATCGCCAC CGGCTTCTTC
TGTCTGGTGC TGGCGGCCAT TTTTGGTTAC GTCTGGCCGC CGGTACAGCA CGCTATCCAT
GCAGGCGGCG AGTGGATCGT TTCTGCGGGC GCGCTGGGTT CCGGTATCTT TGGTTTCATC
AACCGTCTGT TGATCCCAAC CGGTCTGCAT CAGGTGCTGA ACACCATCGC CTGGTTCCAG
ATTGGTGAAT TCACCAACGC GGCGGGTACG GTTTTCCACG GCGACATCAA CCGTTTCTAC
GCTGGTGACG GCACCGCGGG GATGTTCATG TCCGGCTTCT TCCCGATCAT GATGTTCGGC
CTGCCGGGTG CGGCGCTGGC GATGTACTTC GCAGCACCGA AAGAGCGTCG TCCGATGGTT
GGCGGGATGC TGCTTTCTGT TGCTGTTACT GCGTTCCTGA CCGGTGTGAC TGAGCCGCTG
GAATTCCTGT TCATGTTCCT TGCTCCGCTG CTGTACCTCC TGCACGCACT GCTGACCGGT
ATCAGCCTGT TTGTGGCAAC GCTGCTGGGT ATCCATGCCG GCTTCTCTTT CTCTGCGGGG
GCTATCGACT ACGCGTTGAT GTATAACCTG CCGGCCGCCA GCCAGAACGT CTGGATGCTG
CTGGTTATGG GTGTTGTCTT CTTCGCTATC TACTTCGTGG TGTTCAGTTT GGTTATCCGC
ATGTTCAACC TGAAAACGCC GGGTCGTGAA GATAAAGAAG ACGAGATCGT TACTGAAGAA
GCCAACAGCA ACACTGAAGA AGGCCTCAAT CAACTGGCGA CCAACTATAT TGCTGCGGTT
GGCGGCACTG ACAACCTGAA AGCAATTGAC GCCTGTATCA CCCGTCTGCG CCTTACCGTG
GCTGACTCTG CCCGCGTTAA CGATACGATG TGTAAACGTC TGGGGGCTTC TGGGGTAGTA
AAACTGAACA AACAGACTAT TCAGGTGATT GTTGGCGCGA AAGCAGAATC CATCGGCGAT
GCGATGAAGA AAGTCGTTGC CCGTGGCCCG GTAGCAGCTG CCTCTGCTGA AGCAACTCCG
GCAACTGCCG CTCCTGTAGC AAAACCGCAG GCTGTACCAA ACGCGGTATC TATCGCGGAG
CTGGTATCGC CGATTACCGG TGATGTCGTG GCACTGGATC AGGTTCCTGA CGAAGCATTC
GCCAGCAAAG CGGTGGGTGA CGGTGTGGCG GTGAAACCGA CAGATAAAAT CGTCGTATCA
CCAGCCGCAG GAACAATCGT GAAAATCTTC AACACCAACC ACGCGTTCTG CCTGGAAACC
GAAAAAGGCG CGGAGATTGT CGTTCACATG GGTATCGATA CCGTAGCGCT GGAAGGTAAA
GGCTTTAAAC GTCTGGTGGA AGAGGGCGCG CAGGTAAGCG CAGGGCAACC GATTCTGGAA
ATGGATCTGG ATTACCTGAA CGCTAACGCC CGTTCGATGA TTAGCCCGGT GGTTTGCAGC
AATATCGACG ATTTCAGTGG CTTGATCATT AAAGCTCAGG GCCATGTTGT GGCGGGTCAA
ACACCGCTGT ATGAAATCAA AAAGTAA
 
Protein sequence
MNILGFFQRL GRALQLPIAV LPVAALLLRF GQPDLLNVAF IAQAGGAIFD NLALIFAIGV 
ASSWSKDSAG AAALAGAVGY FVLTKAMVTI NPEINMGVLA GIITGLVGGA AYNRWSDIKL
PDFLSFFGGK RFVPIATGFF CLVLAAIFGY VWPPVQHAIH AGGEWIVSAG ALGSGIFGFI
NRLLIPTGLH QVLNTIAWFQ IGEFTNAAGT VFHGDINRFY AGDGTAGMFM SGFFPIMMFG
LPGAALAMYF AAPKERRPMV GGMLLSVAVT AFLTGVTEPL EFLFMFLAPL LYLLHALLTG
ISLFVATLLG IHAGFSFSAG AIDYALMYNL PAASQNVWML LVMGVVFFAI YFVVFSLVIR
MFNLKTPGRE DKEDEIVTEE ANSNTEEGLN QLATNYIAAV GGTDNLKAID ACITRLRLTV
ADSARVNDTM CKRLGASGVV KLNKQTIQVI VGAKAESIGD AMKKVVARGP VAAASAEATP
ATAAPVAKPQ AVPNAVSIAE LVSPITGDVV ALDQVPDEAF ASKAVGDGVA VKPTDKIVVS
PAAGTIVKIF NTNHAFCLET EKGAEIVVHM GIDTVALEGK GFKRLVEEGA QVSAGQPILE
MDLDYLNANA RSMISPVVCS NIDDFSGLII KAQGHVVAGQ TPLYEIKK