| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0766 |
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| Symbol | nagD |
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| ID | 6970605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 782872 |
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| End bp | 783624 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643384795 |
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| Product | UMP phosphatase |
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| Protein accession | YP_002269301 |
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| Protein GI | 209398777 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000485352 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATTA AAAATGTAAT TTGCGATATC GACGGCGTGC TGATGCACGA TAACGTCGCC
GTACCGGGTG CAGCGGAATT TTTGCACGGG ATTATGGATA AAGGCCTGCC GCTGGTGTTG
CTGACCAACT ATCCTTCGCA GACCGGGCAA GATCTGGCGA ACCGCTTTGC CACTGCCGGT
GTCGATGTAC CTGACAGCGT GTTTTATACC TCTGCGATGG CGACCGCCGA TTTCCTGCGT
CGCCAGGAAG GCAAGAAAGC GTATGTTGTG GGCGAAGGCG CACTGATTCA TGAACTGTAC
AAAGCCGGTT TCACTATTAC CGATGTGAAC CCTGATTTTG TGATTGTTGG CGAAACGCGT
TCCTACAACT GGGACATGAT GCATAAAGCG GCCTATTTCG TCGCTAACGG TGCACGCTTT
ATCGCCACCA ACCCGGACAC CCACGGGCGC GGTTTTTATC CGGCCTGTGG CGCGTTGTGT
GCAGGGATTG AGAAAATCTC CGGGCGCAAA CCGTTCTATG TTGGTAAGCC GAGTCCGTGG
ATTATCCGCG CGGCATTAAA CAAAATGCAG GCACATTCGG AAGAAACGGT GATTGTCGGC
GATAACCTGC GTACCGATAT TCTGGCCGGC TTCCAGGCAG GTCTGGAGAC GATTCTGGTG
CTTTCTGGTG TTTCGTCGCT CGACGATATC GACAGTATGC CTTTCCGCCC CAGCTGGATT
TACCCGTCAG TCGCTGAAAT CGACGTTATC TGA
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| Protein sequence | MTIKNVICDI DGVLMHDNVA VPGAAEFLHG IMDKGLPLVL LTNYPSQTGQ DLANRFATAG
VDVPDSVFYT SAMATADFLR RQEGKKAYVV GEGALIHELY KAGFTITDVN PDFVIVGETR
SYNWDMMHKA AYFVANGARF IATNPDTHGR GFYPACGALC AGIEKISGRK PFYVGKPSPW
IIRAALNKMQ AHSEETVIVG DNLRTDILAG FQAGLETILV LSGVSSLDDI DSMPFRPSWI
YPSVAEIDVI
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