Gene ECH74115_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0528 
Symbol 
ID6966714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp533575 
End bp533946 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content55% 
IMG OID643384575 
Productcompetence protein ComEA 
Protein accessionYP_002269089 
Protein GI209400646 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.108871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.740577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG GAATTAAAGC ACTGCTCATT ACCCTGTCCC TGGCCTGTGC CGGAATGTCT 
CATAGCGCGC TGGCGGCAGC TTCTGTGGCG AAACCGACGG CGGTAGAAAC CAAAGCGGAA
GCTCCTGCAG CACAAAATAA AGCAGCAGTA CCGGCGAAAG CCAGTGACGA AGAAGGCTCC
CGGGTCAGCA TTAATAATGC CAGCGCGGAA GAGCTAGCCC GCGCGATGAA TGGCGTTGGC
CTGAAGAAAG CGCAAGCGAT TGTCAGTTAT CGCGAAGAGT ACGGTCCGTT TAAAACGGTG
GAGGATCTAA AGCAGGTGCC GGGGATGGGC AATTCGCTGG TGGAACGTAA TCTGGCGGTA
TTAACCCTGT AA
 
Protein sequence
MKHGIKALLI TLSLACAGMS HSALAAASVA KPTAVETKAE APAAQNKAAV PAKASDEEGS 
RVSINNASAE ELARAMNGVG LKKAQAIVSY REEYGPFKTV EDLKQVPGMG NSLVERNLAV
LTL