Gene ECH74115_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0424 
SymbolmhpC 
ID6970159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp433438 
End bp434304 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content54% 
IMG OID643384476 
Product2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 
Protein accessionYP_002268990 
Protein GI209399853 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AGCCACAAAC CGAAGCCGCC ACCAGCCGTT TTCTGAATGT AGAAGAAGCG 
GGTAAAACGC TGCGCATCCA TTTTAATGAC TGCGGACAAG GCGACGAAAC CGTTGTCCTG
CTGCATGGTT CCGGCCCGGG TGCTACTGGC TGGGCGAACT TCAGCCGCAA TATCGATCCG
CTGGTAGAGG CGGGCTATCG GGTGATCCTG CTGGATTGTC CGGGTTGGGG CAAGAGCGAT
TCGATCGTTA ATAGTGGTTC GCGATCGGAT CTTAATGCAC GAATCCTGAA AAGCGTGGTG
GATCAACTGG ATATCGCCAA AATCCACCTG CTGGGCAACT CGATGGGTGG CCATAGTTCT
GTGGCGTTCA CCCTTAACTG GCCGGAGCGC GTCGGCAAAC TGGTGCTGAT GGGCGGCGGT
ACGGGCGGCA TGAGTTTGTT TACGCCGATG CCAACCGAAG GTATTAAGCG ACTGAATCAG
CTTTATCGTC AGCCGACTAT CGAAAACCTG AAGCTGATGA TGGATATCTT CGTTTTTGAT
ACCAGCGATT TGACCGACGC CCTGTTTGAA GCGCGCCTGA ATAATATGCT GTCGCGCCGC
GATCACCTGG AAAACTTCGT TAAGAGCCTG GAAGCTAATC CGAAACAGTT CCCGGATTTT
GGCCCACGTC TGGCGGAAAT CAAAGCGCAA ACCCTGATTG TCTGGGGGCG CAACGACCGC
TTTGTGCCGA TGGATGCGGG TCTGCGTCTG CTGTCCGGCA TTGCCGGTTC TGAACTGCAT
ATCTTCCGCG ACTGTGGGCA TTGGGCGCAG TGGGAACATG CCGACGCTTT CAATCAACTG
GTGCTGAATT TCCTCGCACG TGCTTAA
 
Protein sequence
MSYQPQTEAA TSRFLNVEEA GKTLRIHFND CGQGDETVVL LHGSGPGATG WANFSRNIDP 
LVEAGYRVIL LDCPGWGKSD SIVNSGSRSD LNARILKSVV DQLDIAKIHL LGNSMGGHSS
VAFTLNWPER VGKLVLMGGG TGGMSLFTPM PTEGIKRLNQ LYRQPTIENL KLMMDIFVFD
TSDLTDALFE ARLNNMLSRR DHLENFVKSL EANPKQFPDF GPRLAEIKAQ TLIVWGRNDR
FVPMDAGLRL LSGIAGSELH IFRDCGHWAQ WEHADAFNQL VLNFLARA