Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0416 |
Symbol | lacY |
ID | 6970848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 422301 |
End bp | 423554 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643384468 |
Product | galactoside permease |
Protein accession | YP_002268982 |
Protein GI | 209400635 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.64566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACTATT TAAAAAACAC AAACTTTTGG ATGTTCGGTT TATTCTTTTT CTTTTACTTT TTTATCATGG GAGCCTACTT CCCGTTTTTC CCGATTTGGC TACATGACAT CAACCATATC AGCAAAAGTG ATACGGGTAT TATTTTTGCT GCTATTTCTC TGTTCTCGCT ATTATTCCAA CCGCTGTTTG GTCTGCTTTC TGACAAACTC GGGCTGCGCA AATACCTGCT GTGGATTATT ACCGGCATGT TAGTGATGTT TGCGCCGTTC TTTATTTTTA TCTTCGGGCC ACTGTTACAA TACAACATTT TAGTAGGATC GATTGTTGGT GGTATTTATC TTGGCTTTTG TTTTAACGCC GGTGCGCCCG CAGTAGAGGC ATTTATCGAG AAAGTCAGCC GTCGCAGTAA TTTCGAATTT GGTCGCGCGC GGATGTTTGG CTGTGTTGGC TGGGCGCTGT GTGCCTCGAT TGTCGGCATC ATGTTCACCA TCAATAATCA GTTCGTTTTC TGGCTGGGTT CTGGCTGTGC ACTCATCCTC GCCATTTTAC TCTTTTTCGC CAAAACGGAT GCGCCCTCTT CCGCCACGGT TGCCAATGCG GTAGGTGCCA ACCATTCGGC ATTTAGCCTT AAACTGGCGC TGGAACTGTT CAGACAGCCA AAACTGTGGT TTTTGTCACT GTATGTTATT GGCGTTTCCT GCACCTACGA TGTTTTTGAC CAACAGTTTG CTAATTTCTT TACTTCTTTC TTTGCCACCG GTGAACAGGG TACGCGGGTA TTTGGCTACG TAACGACAAT GGGCGAATTA CTTAACGCCT CAATTATGTT CTTTGCGCCA CTGATCATTA ATCGCATCGG TGGGAAAAAT GCCCTGCTGC TGGCTGGCAC TATTATGTCT GTACGTATTA TTGGCTCATC GTTCGCCACC TCAGCGCTGG AAGTGGTTAT TCTGAAAACG CTGCATATGT TTGAAGTACC GTTCCTGCTG GTGGGCTGCT TTAAATATAT TACCAGCCAG TTTGAAGTGC GTTTTTCAGC GACGATTTAT CTGGTCTGTT TCTGCTTCTT TAAGCAACTG GCGATGATTT TTATGTCTGT ACTAGCGGGT AATATGTATG AAAGCATCGG TTTCCAGGGC GCTTATCTGG TGCTGGGTCT GGTGGCGCTG GGCTTCACCT TAATTTCCGT GTTCACGCTT AGCGGCCCCG GCCCGCTTTC TCTACTGCGT CGTCAGGTGA ATGAAGTCGC TTAA
|
Protein sequence | MYYLKNTNFW MFGLFFFFYF FIMGAYFPFF PIWLHDINHI SKSDTGIIFA AISLFSLLFQ PLFGLLSDKL GLRKYLLWII TGMLVMFAPF FIFIFGPLLQ YNILVGSIVG GIYLGFCFNA GAPAVEAFIE KVSRRSNFEF GRARMFGCVG WALCASIVGI MFTINNQFVF WLGSGCALIL AILLFFAKTD APSSATVANA VGANHSAFSL KLALELFRQP KLWFLSLYVI GVSCTYDVFD QQFANFFTSF FATGEQGTRV FGYVTTMGEL LNASIMFFAP LIINRIGGKN ALLLAGTIMS VRIIGSSFAT SALEVVILKT LHMFEVPFLL VGCFKYITSQ FEVRFSATIY LVCFCFFKQL AMIFMSVLAG NMYESIGFQG AYLVLGLVAL GFTLISVFTL SGPGPLSLLR RQVNEVA
|
| |