Gene ECH74115_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0238 
Symbol 
ID6968883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp253890 
End bp254651 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content53% 
IMG OID643384309 
Producthypothetical protein 
Protein accessionYP_002268825 
Protein GI209395897 
COG category[S] Function unknown 
COG ID[COG3455] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03349] type IV / VI secretion system protein, DotU family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGG GGTCACTGTC TCTGCCACCA TTTACCGGAT ACGACGAAAA AAGCCTGCGC 
GACTACCATC TCGCGCTTCA TGGCAACAGC CTGAATCCGA TGATCGACGC GGCGACGCCG
CTACTCGGTA TGGTAATGCG CCTTTCCACC ATGAACAGCC AGACGATGCC GGAGCATCTT
TTTGCTCAGG TGGTGACAGA TGTTCAGGCC GTGGAGCAAC TGCTTCAGGA ACAGGGCTAC
GAACCGGGCG TGATTATCTC GTTTCGCTAC ATCCTCTGCA CGTTTATTGA TGAAGCGGCG
CTCGGTAACG GCTGGTCGAA CAAGAACGAG TGGATCAAGC AGTCATTGCT GGTCCATTTC
CACAACGAAG CCTGGGGTGG CGAGAAAGTT TTCATCCTGC TGGAGCGCCT GATCCGTGAA
CCCAAACGTT ACCAGGATCT GCTGGAATTT CTCTGGCTCT GTTTTTCTCT GGGATTTCGC
GGGCGCTACA AAGTGGCAGT ACAGGATCAG GGGGAATTTG AGCAGATCTA CCGCCGTCTG
TACCACGTTC TGCATAAACT GCGCGGCGAT GCCCCTTTCC CGCTGTTACA CCAGGACAAA
AAAACCCAAG GCGGGCGTTA TCAGCTCATC AGTCGCCTGA CTGTTAAACA TATTTTTTGT
GGTGGCGTTG TCGTGCTGGC GTTGTTTTAC CTGTTCTATC TGTTGCGGCT GGACAGCCAG
ACGCAGGACA TCCTGCACCA GCTAAACAAA TTACTTCGAT AA
 
Protein sequence
MDEGSLSLPP FTGYDEKSLR DYHLALHGNS LNPMIDAATP LLGMVMRLST MNSQTMPEHL 
FAQVVTDVQA VEQLLQEQGY EPGVIISFRY ILCTFIDEAA LGNGWSNKNE WIKQSLLVHF
HNEAWGGEKV FILLERLIRE PKRYQDLLEF LWLCFSLGFR GRYKVAVQDQ GEFEQIYRRL
YHVLHKLRGD APFPLLHQDK KTQGGRYQLI SRLTVKHIFC GGVVVLALFY LFYLLRLDSQ
TQDILHQLNK LLR