Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0238 |
Symbol | |
ID | 6968883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 253890 |
End bp | 254651 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643384309 |
Product | hypothetical protein |
Protein accession | YP_002268825 |
Protein GI | 209395897 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGAGG GGTCACTGTC TCTGCCACCA TTTACCGGAT ACGACGAAAA AAGCCTGCGC GACTACCATC TCGCGCTTCA TGGCAACAGC CTGAATCCGA TGATCGACGC GGCGACGCCG CTACTCGGTA TGGTAATGCG CCTTTCCACC ATGAACAGCC AGACGATGCC GGAGCATCTT TTTGCTCAGG TGGTGACAGA TGTTCAGGCC GTGGAGCAAC TGCTTCAGGA ACAGGGCTAC GAACCGGGCG TGATTATCTC GTTTCGCTAC ATCCTCTGCA CGTTTATTGA TGAAGCGGCG CTCGGTAACG GCTGGTCGAA CAAGAACGAG TGGATCAAGC AGTCATTGCT GGTCCATTTC CACAACGAAG CCTGGGGTGG CGAGAAAGTT TTCATCCTGC TGGAGCGCCT GATCCGTGAA CCCAAACGTT ACCAGGATCT GCTGGAATTT CTCTGGCTCT GTTTTTCTCT GGGATTTCGC GGGCGCTACA AAGTGGCAGT ACAGGATCAG GGGGAATTTG AGCAGATCTA CCGCCGTCTG TACCACGTTC TGCATAAACT GCGCGGCGAT GCCCCTTTCC CGCTGTTACA CCAGGACAAA AAAACCCAAG GCGGGCGTTA TCAGCTCATC AGTCGCCTGA CTGTTAAACA TATTTTTTGT GGTGGCGTTG TCGTGCTGGC GTTGTTTTAC CTGTTCTATC TGTTGCGGCT GGACAGCCAG ACGCAGGACA TCCTGCACCA GCTAAACAAA TTACTTCGAT AA
|
Protein sequence | MDEGSLSLPP FTGYDEKSLR DYHLALHGNS LNPMIDAATP LLGMVMRLST MNSQTMPEHL FAQVVTDVQA VEQLLQEQGY EPGVIISFRY ILCTFIDEAA LGNGWSNKNE WIKQSLLVHF HNEAWGGEKV FILLERLIRE PKRYQDLLEF LWLCFSLGFR GRYKVAVQDQ GEFEQIYRRL YHVLHKLRGD APFPLLHQDK KTQGGRYQLI SRLTVKHIFC GGVVVLALFY LFYLLRLDSQ TQDILHQLNK LLR
|
| |