| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0128 |
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| Symbol | speE |
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| ID | 6968131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 139951 |
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| End bp | 140817 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643384205 |
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| Product | spermidine synthase |
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| Protein accession | YP_002268728 |
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| Protein GI | 209395821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000545109 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA AAAAACAGTG GCATGAAACG CTACACGACC AGTTTGGGCA GTACTTTGCG
GTAGATAACG TTCTGTATCA TGAAAAGACC GATCACCAGG ATCTGATCAT TTTTGAGAAC
GCTGCATTTG GTCGCGTAAT GGCGCTGGAT GGCGTAGTAC AAACCACCGA GCGCGACGAG
TTTATCTATC ATGAGATGAT GACCCATGTT CCGCTACTGG CCCACGGTCA CGCGAAACAT
GTGCTGATTA TCGGCGGCGG CGACGGTGCC ATGCTGCGTG AAGTAACCCG ACATAAAAAC
GTTGAGTCAA TCACGATGGT GGAAATCGAT GCGGGTGTCG TGTCGTTCTG CCGTCAGTAT
CTACCCAACC ATAACGCCGG TAGCTACGAC GATCCGCGCT TTAAGCTGGT GATCGACGAT
GGCGTCAATT TCGTTAATCA AACCAGCCAG ACCTTTGATG TCATTATCTC CGACTGCACC
GATCCTATCG GTCCCGGCGA AAGCCTTTTC ACTTCGGCAT TTTATGAAGG CTGCAAACGT
TGCCTGAATC CTGGCGGTAT CTTCGTCGCA CAAAACGGCG TCTGCTTTTT ACAGCAGGAA
GAAGCCATCG ACAGCCATCG CAAACTCAGC CATTACTTCA GCGACGTTGG CTTTTATCAG
GCGGCGATCC CGACCTATTA CGGCGGTATC ATGACTTTTG CATGGGCGAC AGATAACGAC
GCCTTACGCC ATCTCTCAAC CGAAATTATT CAGGCGCGTT TTCTCGCCTC TGGCCTGAAA
TGCCGTTATT ACAATCCGGC AGTCCATACG GCAGCTTTTG CCTTACCCCA GTATCTGCAA
GACGCACTGG CTTCACAGCC GTCCTAA
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| Protein sequence | MAEKKQWHET LHDQFGQYFA VDNVLYHEKT DHQDLIIFEN AAFGRVMALD GVVQTTERDE
FIYHEMMTHV PLLAHGHAKH VLIIGGGDGA MLREVTRHKN VESITMVEID AGVVSFCRQY
LPNHNAGSYD DPRFKLVIDD GVNFVNQTSQ TFDVIISDCT DPIGPGESLF TSAFYEGCKR
CLNPGGIFVA QNGVCFLQQE EAIDSHRKLS HYFSDVGFYQ AAIPTYYGGI MTFAWATDND
ALRHLSTEII QARFLASGLK CRYYNPAVHT AAFALPQYLQ DALASQPS
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