Gene ECH74115_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0080 
SymbolleuB 
ID6968264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp85455 
End bp86546 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content55% 
IMG OID643384158 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002268681 
Protein GI209399607 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA ATTACCATAT TGCCGTATTG CCGGGGGATG GCATTGGTCC GGAAGTGATG 
ACCCAGGCGC TGAAAGTGCT GGATGCCGTG CGCAACCGCT TTGCGATGCG CATCACTACC
AGCCATTACG ATGTAGGCGG CGCAGCCATT GATAACCACG GGCAACCACT GCCGCCTGCG
ACGGTTGAAG GTTGTGAGCA AGCCGATGCC GTGCTGTTTG GCTCGGTAGG CGGCCCGAAA
TGGGAACATT TACCACCGGA CCAGCAACCA GAACGCGGCG CGCTGTTGCC TTTGCGTAAG
CACTTCAAAT TATTCAGCAA CCTGCGTCCG GCAAAACTGT ATCAGGGGCT GGAAGCATTC
TGTCCGCTGC GTGCAGACAT TGCCGCAAAC GGCTTCGACA TCCTGTGCGT GCGCGAACTG
ACCGGCGGCA TCTATTTCGG TCAGCCAAAA GGCCGCGAAG GTAGCGGACA ATATGAAAAA
GCGTTTGATA CCGAGGTGTA TCACCGTTTT GAGATCGAGC GTATTGCCCG CATCGCGTTT
GAATCTGCTC GTAAACGTCG CCATAAAGTG ACGTCGATCG ATAAAGCCAA CGTGCTGCAA
TCCTCTATTT TATGGCGTGA AATCGTCAAC GAGATCGCCA CGGAATACCC GGATATCGAA
CTGGCGCATA TGTACATCGA CAACGCCACC ATGCAGCTGA TTAAAGATCC ATCACAGTTT
GACGTTCTGC TGTGCTCCAA CCTGTTTGGC GACATTCTGT CTGACGAGTG CGCAATGATC
ACTGGCTCGA TGGGGATGTT GCCTTCCGCC AGCCTGAACG AGCAAGGTTT TGGACTGTAT
GAACCGGCGG GCGGCTCGGC ACCAGATATC GCAGGTAAAA ACATCGCCAA CCCGATTGCG
CAAATTCTGT CGCTGGCACT GCTGCTGCGT TACAGCCTGG ATGCCGATGA TGCGGCTTCC
GCCATTGAAC GCGCCATTAA CCGCGCATTA GAAGAAGGCA TTCGCACCGG GGATTTAGCC
CGTGGCGCTG CCGCCGTTAG TACCGATGAA ATGGGCGATA TCATTGCCCG CTATGTGGCA
GAAGGGGTGT AA
 
Protein sequence
MSKNYHIAVL PGDGIGPEVM TQALKVLDAV RNRFAMRITT SHYDVGGAAI DNHGQPLPPA 
TVEGCEQADA VLFGSVGGPK WEHLPPDQQP ERGALLPLRK HFKLFSNLRP AKLYQGLEAF
CPLRADIAAN GFDILCVREL TGGIYFGQPK GREGSGQYEK AFDTEVYHRF EIERIARIAF
ESARKRRHKV TSIDKANVLQ SSILWREIVN EIATEYPDIE LAHMYIDNAT MQLIKDPSQF
DVLLCSNLFG DILSDECAMI TGSMGMLPSA SLNEQGFGLY EPAGGSAPDI AGKNIANPIA
QILSLALLLR YSLDADDAAS AIERAINRAL EEGIRTGDLA RGAAAVSTDE MGDIIARYVA
EGV