Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0044 |
Symbol | caiT |
ID | 6970666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 44824 |
End bp | 46338 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643384125 |
Product | L-carnitine/gamma-butyrobetaine antiporter |
Protein accession | YP_002268648 |
Protein GI | 209399200 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATG AAAAGAGAAA AACGGGAATA GAACCGAAGG TTTTCTTTCC GCCATTAATA ATCGTCGGCA TACTTTGTTG GCTTACAGTC AGAGATCTGG ATGCGGCGAA TGTCGTTATT AATGCTGTAT TCAGTTACGT CACCAATGTA TGGGGATGGG CATTTGAATG GTATATGGTG GTGATGCTTT TCGGTTGGTT CTGGCTGGTG TTTGGCCCGT ATGCCAAAAA GCGTTTAGGT AACGAACCAC CTGAATTTAG TACCGCCAGT TGGATCTTTA TGATGTTCGC CTCCTGTACG TCTGCTGCCG TACTGTTCTG GGGATCGATT GAGATCTACT ACTACATCTC CACCCCGCCG TTTGGCTTAG AACCGAACTC GACAGGAGCG AAAGAGTTGG GGCTGGCTTA CAGCTTGTTC CTCTGGGGAC CTCTGCCGTG GGCCACTTAC AGCTTCCTTT CAGTCGCCTT CGCTTACTTC TTCTTTGTCC GCAAAATGGA AGTGATTCGC CCCAGCTCCA CCCTGGTGCC GCTGGTAGGT GAAAAACACG CCAAAGGGTT GTTCGGCACT ATCGTCGACA ACTTCTATCT CGTCGCCTTG ATCTTCGCGA TGGGTACCAG TCTGGGCCTT GCCACGCCGC TGGTGACCGA GTGTATGCAA TGGTTGTTTG GCATTCCGCA TACCCTGCAA CTGGACGCTA TCATCATTAC CTGCTGGATT ATCCTCAACG CCATTTGCGT CGCCTGCGGT CTGCAAAAAG GGGTACGTAT CGCCAGTGAC GTGCGTAGTT ACCTGAGCTT CCTGATGCTG GGTTGGGTGT TCATCGTCAG CGGTGCCAGC TTCATCATGA ACTACTTCAC CGATTCGGTG GGGATGTTGC TGATGTATCT GCCGCGCATG TTGTTCTATA CCGATCCCAT CGCTAAAGGC GGCTTCCCGC AGGGCTGGAC CGTGTTCTAC TGGGCATGGT GGGTGATTTA CGCCATCCAG ATGAGTATCT TCCTCGCCCG CATCTCCCGT GGTCGTACTG TGCGTGAACT GTGCTTCGGC ATGGTGATGG GACTGACAGC ATCCACCTGG ATCCTGTGGA CTGTACTCGG TAGTAACACT CTGCTGTTGA TAGATAAAAA CATCATCAAC ATTCCAAATC TGATCGAACA GTACGGTGTG GCGCGCGCCA TCATCGAAAC CTGGGCCGCT CTGCCGCTCA GCACCGCCAC CATGTGGGGC TTCTTCATCC TCTGCTTTAT TGCCACCGTT ACGCTGGTTA ACGCCTGCTC TTATACCCTG GCGATGTCCA CTTGCCGCGA AGTACGCGAT GGTGAAGAAC CACCGCTGCT GGTGCGTATC GGTTGGTCAA TTCTGGTTGG CATTATCGGT ATTGTTTTGC TGGCGCTCGG CGGCCTGAAA CCGATTCAAA CTGCCATTAT CGCCGGAGGA TGCCCGCTGT TCTTCGTCAA CATTATGGTG ACGCTCTCCT TTATTAAAGA CGCGAAACAG AACTGGAAAG ATTAA
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Protein sequence | MKNEKRKTGI EPKVFFPPLI IVGILCWLTV RDLDAANVVI NAVFSYVTNV WGWAFEWYMV VMLFGWFWLV FGPYAKKRLG NEPPEFSTAS WIFMMFASCT SAAVLFWGSI EIYYYISTPP FGLEPNSTGA KELGLAYSLF LWGPLPWATY SFLSVAFAYF FFVRKMEVIR PSSTLVPLVG EKHAKGLFGT IVDNFYLVAL IFAMGTSLGL ATPLVTECMQ WLFGIPHTLQ LDAIIITCWI ILNAICVACG LQKGVRIASD VRSYLSFLML GWVFIVSGAS FIMNYFTDSV GMLLMYLPRM LFYTDPIAKG GFPQGWTVFY WAWWVIYAIQ MSIFLARISR GRTVRELCFG MVMGLTASTW ILWTVLGSNT LLLIDKNIIN IPNLIEQYGV ARAIIETWAA LPLSTATMWG FFILCFIATV TLVNACSYTL AMSTCREVRD GEEPPLLVRI GWSILVGIIG IVLLALGGLK PIQTAIIAGG CPLFFVNIMV TLSFIKDAKQ NWKD
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