Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_A0017 |
Symbol | |
ID | 6966518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011351 |
Strand | + |
Start bp | 11883 |
End bp | 13850 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643384048 |
Product | conjugal transfer protein TraK |
Protein accession | YP_002268527 |
Protein GI | 209395641 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA AAATCATATT AGTGGTTTTT TTATTGCTTA TTCTCGTTGC TTGTCTTATT GGCGGTAATT ATCTTGGGGG ATATGCAGCA TTAAAATATT CAGGATTGAG TATTGACATG TTGCAATGGA ATACATTTAA TAATGTTATT ACACAATTTA GCGGAAAACC TGAATATAAA AAATTGGTCG CGATTACATG GGCTGGATTT GCTGCACCAT GTGCAATATT TATTGGTTTT GTTGTTATTG TCATAGCCGG ACTGATGCCA AAAAAAGTTA TTTATGGCAA TGCTCGTCTT GCTACTGATA TGGACCTGGC TAAATCAACC TTTTTCCCAA CAGATAAAGA GTTGAAAGAA GCAAGATTAA AGAACAGTAA ACCATACTGC TATCCACCTA TTCTTATTGG TAAACAGTTT AAAGGAAGGT TTAAAAACAA ATATATATAT TTCTTCGGGC AACAGTTTTT AATCCTTTAT GCTCCTACGC GTTCTGGTAA AGGTGTTGGT ATTGTTATAC CTAACTGTGT GAATTACCCG GATTCGATGG TTGTTCTTGA TATAAAACTT GAAAACTGGT TTTTGTCTTC CGGATACAGA CAGAATGTGT TAGGGCAGGA ATGTTTTCTG TTTGCTCCTG CGGGATATGC AGAAAACCAG CAGGAGGCGA AAAAAGGTAA TATCAGATCA CACCGCTGGA ATCCTCTGGA CTGCGTTAAT CGTTCTGATA TTCAGCGTTC TGGAGATTTG GAAAAAATTG CCGCTATGTT GATTCCGGCA AGTGATGATC CTATCTGGTC TGATTCTGCA CGGAAGCTCT TTTGTGGGCT TGCTTTATAT CTTCTGGATA AGGAACGATT CCATCTTCAG CAAAAGAAAA AGGGTGTTGC TGATGTACCT GATGTTCTTG TGTCCATGTC GGCTATTATG AAACTCTCTG TCCCTGAAAG TGGTCAGAAA CTATCAGCCT GGATGGGTAC GGAAATAGAT CAGAAAGAAT ACCTGAGTGA TGAAACAAAG AGTCTGTTTC GTGAATTTAT GGCAGCGCCG GAGAAGACAC AAGGAAGTAT TATTACCAAC TTCTCGTCTC CATTGAGTAT TTTTAAGAAC CCAATCACAG CAGCAGCTAC TGATGCAAGT GATTTTGATG TGCGAATGGT CAGGAAAAAG CCTATGTCGA TATATCTTGG GCTGACTCCT GATGCATTAA TTACTCACTC ACGGCTTGTG AATCTATTTT TCTCTATGCT AGTGAATGAG AATACAAAGG AGCTTCCAGA ACAGAATCCT GAGTTGAAAT ATCAGTGTCT TGTCCTTCTT GATGAATTTA CATCAATGGG TAAGTCCGAA ATTATTGAAA AAGGTGTTGG CTTTACCGCT GGTTTTAACC TGCGATTCGT TATTATTTTG CAGAACGAAG GGCAGGGTAA AAAAGATGAT ATGTATGGCA CTCACGGTTG GGAAACTTTC GTTGAAAACT CGGCTGTAGT TCTTTATTAC CCGCCAAAGG CTAAAAATGA ACTGGCGAAA AAGATCTCTG AGGAAATTGG AGTCAGGGAT ATGAAAATTA TCAAGAAATC TGACTCACGG AGTGGTGGCA AAGGTGGTAG TTCTCGTTCC CGAAATCATG AAATAGTCAG CCGTGCTGTA TTACTGCCAG AAGAGATTGT CGAGCTTCGG GATTATAAAA ATAAAATGGG TAATATGGCT GTTCGTGAAA TCGTAATGAG TGAATACACT CGCCCATTTG TAGCTAACAA AATAATCTGG TTTGAAGAGG AGGAGTTTAA AAAACGAGTA GATATAGCTA AAGAAAATCC GGTAGAAATG CCTGTATTGT TCGATGAAGA AATGAGAAAT CAGATTCTGG AACAGGCAAA AATATATTCA GATGATATTA GTATGTTTTC TGATGTTATG ACTAAACCAG ATCTTGAGAC ACACGATCTG GAGGATGTTT CTGAATAA
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Protein sequence | MKKKIILVVF LLLILVACLI GGNYLGGYAA LKYSGLSIDM LQWNTFNNVI TQFSGKPEYK KLVAITWAGF AAPCAIFIGF VVIVIAGLMP KKVIYGNARL ATDMDLAKST FFPTDKELKE ARLKNSKPYC YPPILIGKQF KGRFKNKYIY FFGQQFLILY APTRSGKGVG IVIPNCVNYP DSMVVLDIKL ENWFLSSGYR QNVLGQECFL FAPAGYAENQ QEAKKGNIRS HRWNPLDCVN RSDIQRSGDL EKIAAMLIPA SDDPIWSDSA RKLFCGLALY LLDKERFHLQ QKKKGVADVP DVLVSMSAIM KLSVPESGQK LSAWMGTEID QKEYLSDETK SLFREFMAAP EKTQGSIITN FSSPLSIFKN PITAAATDAS DFDVRMVRKK PMSIYLGLTP DALITHSRLV NLFFSMLVNE NTKELPEQNP ELKYQCLVLL DEFTSMGKSE IIEKGVGFTA GFNLRFVIIL QNEGQGKKDD MYGTHGWETF VENSAVVLYY PPKAKNELAK KISEEIGVRD MKIIKKSDSR SGGKGGSSRS RNHEIVSRAV LLPEEIVELR DYKNKMGNMA VREIVMSEYT RPFVANKIIW FEEEEFKKRV DIAKENPVEM PVLFDEEMRN QILEQAKIYS DDISMFSDVM TKPDLETHDL EDVSE
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