Gene ECH74115_B0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_B0112 
Symbol 
ID6966459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011350 
Strand
Start bp71215 
End bp72318 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content51% 
IMG OID643384008 
ProductUDP-sugar hydrolase 
Protein accessionYP_002268487 
Protein GI209395585 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TATTCACTGA ATCTTCGTCA GATATTGGGG GCCAGGAGCT GCAGGCACTG 
GCCCAGATGA CTGCTCTTCA AAAGCAGGGA CATTCCGTTT TACTTGCCTG CAGAGAAAAA
AGTAAAATTG CTCCGGAAGC CAGAAAAAGA GGGCATGATG TCACTTTTAT TCCTTTCAGG
AACAGCCTTC ACCTTCCTTC CATCCTCAGA CTTCGACGGA TTATCGGGGA ATTTAAACCT
GATCTGGTCA TCTGCCATAG TGGCCATGAC AGTAATATAG CAGGACTGAG CCGTCTGATA
TGCTGTCACC GCTTCAGTAT TGTCAGACAA AAAACCTACA TCACCCGTAA GACCAGAACG
TTTTCCCTGA ATTATCTGTG TGATTTCATT GTTGTGCCTA GCTCAGCCAT GATGGCGCAT
CTGATGGCGG AAGGTGTCAG GACACCGGTA ACGGTTATTC CACCGGGTTT CGACTGGCCC
GCATTGCATA ATGAAGCCAT GCGACCGTTA CCCCTGCATA TCCACGCCTG GGCTGCATCA
GCAGACAATG TTCCGCTTAT CGTTCAGGTG GGGATGCTAC GTCCCGAAAA AGGACATGAA
TTTATGCTGC GTGTATTGTA TCAGCTGAAG ATGGAAGGGA AATCATTTCG CTGGCTCGTG
GTGGGCGCCG GGCGTGAAGA ATACGAAGCA CGTCTGCGTC AGCAGACAGA ACACCTGGGA
ATGAGCGGAG ATGTGTTAAT GGCAGGTGCC CTTTTCCCAG CGTTACCGGT CTACCGGATT
GCCAGTGTGG TGGTCATGCC TTCGGAAAAT GAAGCGTTTG GTATGGTACT GGCTGAAGCG
TCAGTCTCCG GCGTGCCCGT TATCGCCAGT GAGACGGGCG GGATCCCTGA TGTCATTCAG
AAGAATGTGA CAGGGACGCT GTTACCCGTG GGGGATGTGT CTGCATGGAC CGGCGCACTG
CGCGATTTTT TATCCCGACC GGAACGCTTC CGGATGATGG CAGCCAGCGC CAGAGAAGAT
ATTGAGTACC GGTTTGATAT TAACAGAACG GCACAGATCA TTGTGTCTCT GGCTAGTCAG
GCTAAGGGGA AATGCAACAG ATAA
 
Protein sequence
MKILFTESSS DIGGQELQAL AQMTALQKQG HSVLLACREK SKIAPEARKR GHDVTFIPFR 
NSLHLPSILR LRRIIGEFKP DLVICHSGHD SNIAGLSRLI CCHRFSIVRQ KTYITRKTRT
FSLNYLCDFI VVPSSAMMAH LMAEGVRTPV TVIPPGFDWP ALHNEAMRPL PLHIHAWAAS
ADNVPLIVQV GMLRPEKGHE FMLRVLYQLK MEGKSFRWLV VGAGREEYEA RLRQQTEHLG
MSGDVLMAGA LFPALPVYRI ASVVVMPSEN EAFGMVLAEA SVSGVPVIAS ETGGIPDVIQ
KNVTGTLLPV GDVSAWTGAL RDFLSRPERF RMMAASARED IEYRFDINRT AQIIVSLASQ
AKGKCNR