Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_B0019 |
Symbol | |
ID | 6966448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011350 |
Strand | + |
Start bp | 3759 |
End bp | 5879 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643383926 |
Product | type I secretion system ATPase family protein |
Protein accession | YP_002268405 |
Protein GI | 209395565 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGTA AATGTAGTTC TCATAATAGT CTGTATGCAC TGATATTGCT TGCACAATAT CATAATATAA CTGTCAATGC TGAAACTATA AGGCATCAGT ATAATACCCA CACACAAGAT TTTGGGGTGA CTGAATGGTT ACTGGCAGCG AAATCTATTG GCTTAAAAGC AAAATATGTA GAAAAACATT TTTCCAGATT GTCAATAATT TCTTTACCTG CGTTGATATG GCGGGATGAC GGTAAGCATT ATATATTGTC TCGTATTACT AAAGATTCAT CACGCTATCT TGTTTATGAT CCAGAACAAC ATCAGTCACT AACTTTTAGT CGGGATGAGT TTGAAAAACT GTATCAGGGA AAAGTCATTC TGGTTACGTC AAGAGCAACA GTAGTCGGAG AGTTAGCTAA ATTTGATTTT TCTTGGTTTA TCCCCTCTGT TGTGAAATAC AGGAGGATTT TACTTGAGGT GTTAACTGTT TCTGCTTTTA TTCAGTTTCT TGCGTTAATA ACACCTCTTT TTTTTCAGGT TGTAATGGAT AAGGTTTTAG TTCACCGGGG GTTTTCAACG TTAAATATTA TCACAATAGC ATTTATTATA GTGATACTTT TTGAAGTGAT ATTAACCGGA GCCAGAACTT ATATTTTCTC TCATACTACA AGTCGTATTG ACGTCGAACT GGGTGCTAAG TTATTCAGAC ATTTGCTTGC ATTGCCTGTT TCATATTTTG AAAATCGCAG GGTCGGAGAG ACCGTTGCCA GAGTAAGGGA ACTGGAGCAA ATTCGTAATT TTTTAACCGG ACAAGCGTTG ACATCAGTTC TTGATCTATT TTTTTCTGTA ATATTTTTTT GTGTCATGTG GTATTACAGC CCTCAATTAA CACTGGTTAT ATTATTGTCA CTACCTTGTT ATGTTATATG GTCATTGTTT ATATCACCCT TATTACGTCG ACGTCTTGAT GATAAGTTTC TCAGGAATGC AGAAAATCAA GCTTTTCTTG TCGAAACGGT AACAGCAATA AATACAATCA AATCCATGGC AGTATCACCA CAGATGATTG CTACATGGGA TAAACAACTG GCCGGGTATG TTGCTTCCAG TTTCAGGGTA AATCTGGTTG CAATGACAGG GCAGCAGGGG ATACAGCTGA TACAGAAAAG TGTAATGGTA ATTAGTCTAT GGATGGGAGC ACATCTTGTC ATATCGGGAG AGATAAGCAT CGGGCAGTTA ATCGCGTTTA ATATGCTTGC AGGTCAGGTC ATTGCTCCTG TTATCAGACT GGCTCATCTT TGGCAGGATT TTCAGCAGGT TGGTATTTCT GTTGAGCGCC TTGGTGATGT ATTAAATACA CCGGTAGAGA AAAAGTCAGG CAGAAATATA CTGCCGGAAA TTCAGGGGGA TATCGAATTT AAAAATGTCA GATTTCGGTA TTCTTCTGAC GGTAATGTTA TTTTGAATAA TATTAATTTA TACATATCAA AGGGGGATGT TATCGGTATA GTTGGCCGTT CTGGTTCAGG AAAAAGTACA TTAACAAAAC TGCTTCAGCG CTTTTATATA CCAGAGACCG GACAGATTTT AATTGATGGG CATGATTTAT CACTTGCAGA TCCAGAATGG TTACGACGCC AGATTGGTGT TGTATTGCAG GAAAATATAC TATTAAATCG TAGTATTATC GATAATATTA CATTAGCTTC TCCGGCTGTA TCTATGGAAC AGGCTATTGA GGCAGCCAGA CTTGCAGGTG CCCATGATTT TATTAGAGAA CTAAAAGAAG GGTACAATAC TATTGTTGGA GAACAGGGCG TTGGTCTTTC AGGAGGGCAG CGCCAACGGA TCGCAATAGC CCGGGCTCTT GTTACAAATC CTCGAATTCT TATTTTTGAT GAAGCAACCA GTGCTCTTGA TTATGAGTCG GAAAATATAA TAATGAAAAA TATGTCAAGA ATATGTAAGA ACAGAACCGT AATTATTATT GCACACAGGT TGTCAACTGT AAAAAATGCA AACAGAATAA TTGTTATGGA TAATGGCTTT ATTTCTGAAG ATGGCACACA TAAAGAGCTT ATCTCCAAAA AAGACAGTTT ATATGCATAT TTATATCAGT TGCAGGCATA A
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Protein sequence | MMSKCSSHNS LYALILLAQY HNITVNAETI RHQYNTHTQD FGVTEWLLAA KSIGLKAKYV EKHFSRLSII SLPALIWRDD GKHYILSRIT KDSSRYLVYD PEQHQSLTFS RDEFEKLYQG KVILVTSRAT VVGELAKFDF SWFIPSVVKY RRILLEVLTV SAFIQFLALI TPLFFQVVMD KVLVHRGFST LNIITIAFII VILFEVILTG ARTYIFSHTT SRIDVELGAK LFRHLLALPV SYFENRRVGE TVARVRELEQ IRNFLTGQAL TSVLDLFFSV IFFCVMWYYS PQLTLVILLS LPCYVIWSLF ISPLLRRRLD DKFLRNAENQ AFLVETVTAI NTIKSMAVSP QMIATWDKQL AGYVASSFRV NLVAMTGQQG IQLIQKSVMV ISLWMGAHLV ISGEISIGQL IAFNMLAGQV IAPVIRLAHL WQDFQQVGIS VERLGDVLNT PVEKKSGRNI LPEIQGDIEF KNVRFRYSSD GNVILNNINL YISKGDVIGI VGRSGSGKST LTKLLQRFYI PETGQILIDG HDLSLADPEW LRRQIGVVLQ ENILLNRSII DNITLASPAV SMEQAIEAAR LAGAHDFIRE LKEGYNTIVG EQGVGLSGGQ RQRIAIARAL VTNPRILIFD EATSALDYES ENIIMKNMSR ICKNRTVIII AHRLSTVKNA NRIIVMDNGF ISEDGTHKEL ISKKDSLYAY LYQLQA
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