Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_B0011 |
Symbol | gspL |
ID | 6966438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011350 |
Strand | + |
Start bp | 89927 |
End bp | 91066 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643384027 |
Product | general secretion pathway protein L |
Protein accession | YP_002268506 |
Protein GI | 209395546 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.535604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGGAGGC TGATTGCGCC AGAGGAGACA GGAGCCGGCA GTGTGGCAGT CGGAGAAACG GATCCGCAGT TAGTCGGTTT GCTGTCCCGT TATCCCGCCT GGGTGCTGGT TCCGTCAGGC AGAATTGCCT TCCATCAGGT CACGCTGCCA CACCGCACGT GGCGTCAGCG TTTGCAGGTG CTGCCCTTTC TTCTGGAAGA GCAGTTGGCG ACAGACATTG AGCAGCTGCA CTTCGCCATT CTTCATCAGT CGGGTGACAG GTGTGATGTG GCGGTGGTCG AAAAAGCGGT TATGCATCGC TGGTTAGCGT ACTGTGGACA ACTTGGGGTT CGGGAGGTGA GGTTGCTGCC TGACGTACTG ATGCTGCCGT TGGCAACTGA AGGATGGAGT GCCGTAAAGC TTGCCGGGCA GTGGCTGTTT CGCCGGGATC GTTACGCCGG GATGACGGTA GAGTTATCGT GGCTGACACA TTTCTTGTCT CTTACTGCGC CGCCGGTGAT TGAGTCCTAC TCCGTGCCGC CAGTACCGTG CCCGGGTCCG AAGACCACTG AGTGGCGAAA TCAGCCCGGA CGCGATCTGC TGCAGTTGGT GGCCGAAGGT GACGGGTATG ATGGCGCAGA TCTGCGGCAG GGAGAATTTG CCCGCCAGGG AACATGGTAT GCACGATTTC GCCCATGGAG GTATGTCGCA GGGGCTCTGC TGGCCTGTGT TTTTCTGGCC GGGAGCAACG CGGGGCTGGC ACATTATCGG CTCTGGCAGC AGGCTCAATT CTGGCGGTAT GAGAGCGTAC GTGTCTATCA GCAGCTGTTT CCGAGTGAAA AGGCGGTGAA GGATCCCCGC CGGCAGATGC TGAGACATCT GCAACAGTCG ACGGGTAACA ATATACCGGA ACTCGGGAGC GTGATGCGCC AGCTTCAGCA ACTGCTGTCA GAAACCTCAA CGATACGCTT ACAGGCACTC GCCTGGGACA GCAGCAGCCA GACACTGAAA ATTGATTTGC AGGCGGCTTC TTTTCAGGCG CTGGAACACT TTCAGCAGAT CGCCGGAGAA AAATACCTCA TCCAGCCTGG TGAGATACGA CAGCAGCCGC AGGGGGTAGA AAGTCGTCTG ATCCTGAGAG TGAACAATGA ACGAGCTTAA
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Protein sequence | MWRLIAPEET GAGSVAVGET DPQLVGLLSR YPAWVLVPSG RIAFHQVTLP HRTWRQRLQV LPFLLEEQLA TDIEQLHFAI LHQSGDRCDV AVVEKAVMHR WLAYCGQLGV REVRLLPDVL MLPLATEGWS AVKLAGQWLF RRDRYAGMTV ELSWLTHFLS LTAPPVIESY SVPPVPCPGP KTTEWRNQPG RDLLQLVAEG DGYDGADLRQ GEFARQGTWY ARFRPWRYVA GALLACVFLA GSNAGLAHYR LWQQAQFWRY ESVRVYQQLF PSEKAVKDPR RQMLRHLQQS TGNNIPELGS VMRQLQQLLS ETSTIRLQAL AWDSSSQTLK IDLQAASFQA LEHFQQIAGE KYLIQPGEIR QQPQGVESRL ILRVNNERA
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