Gene ECH74115_B0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_B0011 
SymbolgspL 
ID6966438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011350 
Strand
Start bp89927 
End bp91066 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content57% 
IMG OID643384027 
Productgeneral secretion pathway protein L 
Protein accessionYP_002268506 
Protein GI209395546 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3297] Type II secretory pathway, component PulL 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.535604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGAGGC TGATTGCGCC AGAGGAGACA GGAGCCGGCA GTGTGGCAGT CGGAGAAACG 
GATCCGCAGT TAGTCGGTTT GCTGTCCCGT TATCCCGCCT GGGTGCTGGT TCCGTCAGGC
AGAATTGCCT TCCATCAGGT CACGCTGCCA CACCGCACGT GGCGTCAGCG TTTGCAGGTG
CTGCCCTTTC TTCTGGAAGA GCAGTTGGCG ACAGACATTG AGCAGCTGCA CTTCGCCATT
CTTCATCAGT CGGGTGACAG GTGTGATGTG GCGGTGGTCG AAAAAGCGGT TATGCATCGC
TGGTTAGCGT ACTGTGGACA ACTTGGGGTT CGGGAGGTGA GGTTGCTGCC TGACGTACTG
ATGCTGCCGT TGGCAACTGA AGGATGGAGT GCCGTAAAGC TTGCCGGGCA GTGGCTGTTT
CGCCGGGATC GTTACGCCGG GATGACGGTA GAGTTATCGT GGCTGACACA TTTCTTGTCT
CTTACTGCGC CGCCGGTGAT TGAGTCCTAC TCCGTGCCGC CAGTACCGTG CCCGGGTCCG
AAGACCACTG AGTGGCGAAA TCAGCCCGGA CGCGATCTGC TGCAGTTGGT GGCCGAAGGT
GACGGGTATG ATGGCGCAGA TCTGCGGCAG GGAGAATTTG CCCGCCAGGG AACATGGTAT
GCACGATTTC GCCCATGGAG GTATGTCGCA GGGGCTCTGC TGGCCTGTGT TTTTCTGGCC
GGGAGCAACG CGGGGCTGGC ACATTATCGG CTCTGGCAGC AGGCTCAATT CTGGCGGTAT
GAGAGCGTAC GTGTCTATCA GCAGCTGTTT CCGAGTGAAA AGGCGGTGAA GGATCCCCGC
CGGCAGATGC TGAGACATCT GCAACAGTCG ACGGGTAACA ATATACCGGA ACTCGGGAGC
GTGATGCGCC AGCTTCAGCA ACTGCTGTCA GAAACCTCAA CGATACGCTT ACAGGCACTC
GCCTGGGACA GCAGCAGCCA GACACTGAAA ATTGATTTGC AGGCGGCTTC TTTTCAGGCG
CTGGAACACT TTCAGCAGAT CGCCGGAGAA AAATACCTCA TCCAGCCTGG TGAGATACGA
CAGCAGCCGC AGGGGGTAGA AAGTCGTCTG ATCCTGAGAG TGAACAATGA ACGAGCTTAA
 
Protein sequence
MWRLIAPEET GAGSVAVGET DPQLVGLLSR YPAWVLVPSG RIAFHQVTLP HRTWRQRLQV 
LPFLLEEQLA TDIEQLHFAI LHQSGDRCDV AVVEKAVMHR WLAYCGQLGV REVRLLPDVL
MLPLATEGWS AVKLAGQWLF RRDRYAGMTV ELSWLTHFLS LTAPPVIESY SVPPVPCPGP
KTTEWRNQPG RDLLQLVAEG DGYDGADLRQ GEFARQGTWY ARFRPWRYVA GALLACVFLA
GSNAGLAHYR LWQQAQFWRY ESVRVYQQLF PSEKAVKDPR RQMLRHLQQS TGNNIPELGS
VMRQLQQLLS ETSTIRLQAL AWDSSSQTLK IDLQAASFQA LEHFQQIAGE KYLIQPGEIR
QQPQGVESRL ILRVNNERA