Gene VSAL_p54_03 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_p54_03 
Symbol 
ID6989606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011315 
Strand
Start bp3432 
End bp5360 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content36% 
IMG OID 
Productacyltransferase 
Protein accessionYP_002265402 
Protein GI209809835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.362945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTC GGTATGACAT TAATGGTTTA AGAGCAATTG CAGTGATCGC AGTGGTTCTT 
TTCCATTTTA ACCCTGCTTG GGTTCCCGGT GGTTTCGCTG GCGTAGATGT GTTCTTTGTG
ATTTCAGGAT TTCTGATGAC AAGTATTATC TTTCGAGGGT TAGATAATGA TAATTTTAAC
TTGTTTAAGT TCTACGTAGC TCGAGCCAAT CGAATAATTC CAGCTCTTGC TGTTTTATGT
TTGGTTCTTA TGGTCTTTGG TTGGTTCTAT CTTAACCCGT TGGATTACAA AGCCCTCGGT
AAGCATGTTG CTAGTAGTAT GGGTTTTCTT TCTAATATTA TTTATTGGAG AGAATCTGGA
TACTTTGATG CAGCCTCTCA TGAGAAATGG CTGTTACATA CATGGTCATT ATCTGTTGAA
TGGCAGTTCT ACATTATCTA TCCAATTGTA TTAGTAGCAC TTAAGAAATT TTTATCTCTT
GAAAACTTAA AGCGATTAAT TGTTATTGGG ACAGTTTTAG GTTTTTGTCT AAGTGTTATC
GCAACAATGA AGTGGCCAAA CCCAGCGTAC TATCTTCTTC CAACAAGAGC TTGGGAAATG
ATGATGGGGG GTGTGGCGTT TCTTTATCCT TGGAACTTGT CTGAAAGTAA AAAGAAAATC
ATAGAGGTTA CAGGCCTAGC TCTAATCCTA GGTTCGTATG CTTTTGTTTC TAGTGATGTG
TCATGGCCAG GATATCTTGC TTTGCTTCCA GTCCTTGGTG CTTATCTTGT GATTGTTGCA
AATCAGCAGT CTAGTTTTAT TACTAATAAC TATCTATTCC AAAACTTAGG GAAATGGTCA
TATTCAATTT ACTTGTGGCA CTGGCCTGTT GTTGTTGCAG GGATCTTTTT TGAGTATAAA
AGTTTTGAAT TGGCAGGTGT TTTTCTATCA GTTGTTTTAG GCTTTTTAAG TTTTAAATTT
ATTGAGAGTG CTAATTTCCC ATCTTTTGAA AGGTGGTCTG ATGCACTAAA AGTAAAACCG
TTGCACTTCA CTCTTATGCT AGGTTTTATT GGCTCTTTGG TGTTTGTGTT TAGGCCTAAC
CAATTTTTAT TTCCAATGAA AGAGTCGGTG CTTAACTCTA TAGAAAGAAA ACCTTATGAA
TGTTTCGATA AAGAAATGAT GCATGAGAAT GATGATGTTG TTTGCCAATT AACTAAAGGT
GAATCAGCTA TTCTTGCGAT TGGTGATTCT CACTCATACT CATCACTTCC CGCTATTGAA
TCTATTGCTA AGAGCAACAA CTTAGAACTT TATTACACAG GGTTTAATGG CTGCCCTCCT
ATCATCGGAG TATCTCCAAT TCGAGGTGAT CAGCATTTAA AGAACTGTAA AATTTTGAAT
CAAAGAGCAT TAGACTTTGC GTTGGGTAAG CAAGTTAAAA CCGTATTTTT AGCTGCTCGA
TGGACGTACT ATACGGAAGG GACATACTCA AAAACGGGTG TTCAATACTT AACTATTGAT
AATAATGAAC GTGGCTTAGA TGTATCAAAA AGAGCACTAA TGACAGGGCT TAAAGATACA
TTTAAGGCTT ATTTTGATAA TGGCATAAAT GTTGTTGTAA TGCTTCAGGT TCCAATGCAG
AAGCATGATC CAGATAAGAT TTATTATCGA TCGATATCTA ATGGAAAGCT ACTAACTTCA
AAGTTAGCTA AAAACTCAAT TTCTTTAGAA GAACATGTTA AATTTCAATT TGAAACCAAT
CATTTAATTA AGTCACTAGC TGTTTCCTAT CCGAATGTGA CTATTTACGA TCCTACTTCA
GATATGTGTG TCGAAGGACA ATGTTTGGTA GGTAGTGTAG ATGTTTCTTA TTATTTTGAT
GATGACCACT TGTCTATTCT TGGTGCTAGA AAGTTAGTTG AACCAATTAG TAAGTTTTTA
GTCGATTAA
 
Protein sequence
MNFRYDINGL RAIAVIAVVL FHFNPAWVPG GFAGVDVFFV ISGFLMTSII FRGLDNDNFN 
LFKFYVARAN RIIPALAVLC LVLMVFGWFY LNPLDYKALG KHVASSMGFL SNIIYWRESG
YFDAASHEKW LLHTWSLSVE WQFYIIYPIV LVALKKFLSL ENLKRLIVIG TVLGFCLSVI
ATMKWPNPAY YLLPTRAWEM MMGGVAFLYP WNLSESKKKI IEVTGLALIL GSYAFVSSDV
SWPGYLALLP VLGAYLVIVA NQQSSFITNN YLFQNLGKWS YSIYLWHWPV VVAGIFFEYK
SFELAGVFLS VVLGFLSFKF IESANFPSFE RWSDALKVKP LHFTLMLGFI GSLVFVFRPN
QFLFPMKESV LNSIERKPYE CFDKEMMHEN DDVVCQLTKG ESAILAIGDS HSYSSLPAIE
SIAKSNNLEL YYTGFNGCPP IIGVSPIRGD QHLKNCKILN QRALDFALGK QVKTVFLAAR
WTYYTEGTYS KTGVQYLTID NNERGLDVSK RALMTGLKDT FKAYFDNGIN VVVMLQVPMQ
KHDPDKIYYR SISNGKLLTS KLAKNSISLE EHVKFQFETN HLIKSLAVSY PNVTIYDPTS
DMCVEGQCLV GSVDVSYYFD DDHLSILGAR KLVEPISKFL VD