| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1031 |
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| Symbol | |
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| ID | 6962343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 1129186 |
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| End bp | 1130205 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643382279 |
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| Product | ABC transport system, ATP-binding protein |
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| Protein accession | YP_002265310 |
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| Protein GI | 209809771 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTATG TAAGCGTAAA TAAATTAACG AAACGTTTTG GTGATAATAC CGTATTTGAA
GATGTGAGTT TCAATATCGA AAAAGGGGAA TTCATCACGT TATTAGGCCC AAGTGGTTGT
GGTAAATCAA CACTACTTCG TAGCTTGACG GGCTTAGATC CCATCAATAA CGGCGAAATT
TGGGTAAATG GCGAAAACAT CACAAATCAA ACACCACAAC AACGTGGCAT TGGGATGGTG
TTTCAATCTT ATGCCTTATT TCCTAATATG ACCGTAAAAG AAAACATCGC ATTTGGTTTG
AAAATGAAAA AAATCGATGC AAATACGGTC GAAAAAGAGG TAAATAAAGT CATTGAATTG
GTTGATTTGA ATGGCAAAGA AGATCACTAT CCACATCAAC TTTCTGGCGG ACAACGTCAA
CGAGTAGCAT TGGCTCGTGC GTTAGTTGTA AAACCTAGAA TATTATTACT GGATGAGCCA
TTATCGGCAT TAGATGCAAA GATCAGAAAA CGCCTTCGCC AACAAATCCG TGATATTCAA
AAAGAGCTGA ACTTAACGAC GATCTTTGTC ACTCACGATC AAGAGGAAGC GATGATAATG
TCCGATCGCA TCTTTTTAAT GAACCAAGGC GAAATCGTTC AACAAGGATC ACCAGAAGAA
ATATATACCC AACCTGCAAA TGAGTTTGTG GCTGGTTTCA TGGGGCACTA TAATTTAGTT
GACGCACCAA AAGCAAAACA ACTCTTTGAT ATTGAAACAG AGTGGAAAGT CGCCATTCGT
CCAGAATCGA TTTATGTAAA AGAAGAAGGT CGGCACTATG CCGAGCATAT TTCAGCCCCA
AAACAAGGCA TTATTAAGAG CCACCAATTA CTTGGTAATG TTATTCGCTA CCAAGTCGAT
GTAAATAATT GCGATCTTAC CGTCGATTTA TTGAATCGTT CTTCAGAAAG GCTGTTAGCC
GCAGGAAGTA CATTAGACTT ACTCTTTAAT CTTAACGAAA TTCAACCAGT GAGAGCTTAA
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| Protein sequence | MSYVSVNKLT KRFGDNTVFE DVSFNIEKGE FITLLGPSGC GKSTLLRSLT GLDPINNGEI
WVNGENITNQ TPQQRGIGMV FQSYALFPNM TVKENIAFGL KMKKIDANTV EKEVNKVIEL
VDLNGKEDHY PHQLSGGQRQ RVALARALVV KPRILLLDEP LSALDAKIRK RLRQQIRDIQ
KELNLTTIFV THDQEEAMIM SDRIFLMNQG EIVQQGSPEE IYTQPANEFV AGFMGHYNLV
DAPKAKQLFD IETEWKVAIR PESIYVKEEG RHYAEHISAP KQGIIKSHQL LGNVIRYQVD
VNNCDLTVDL LNRSSERLLA AGSTLDLLFN LNEIQPVRA
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