Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0887 |
Symbol | |
ID | 6962224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 972176 |
End bp | 972919 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643382155 |
Product | putative hydrolase |
Protein accession | YP_002265186 |
Protein GI | 209809647 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.214006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATTC AGGTAGATAC TCACACTTAT GCTAGTGGCC ATGCTTACAG TACAATCAGT GAGAATGCTT TTTCAGCATC CACACTTGGT TTACCTATGT TTTGTACTAC AGATCACGCC TCTTCAATGC CTGGCGCGCC ACATTATTGG TTTTTCAGTA ATCAGCGCGT ATTACCTCGT TTTCTTCATG GTGTCGCTAT TCTTAGGGGC TGCGAAGTCA ACATTTGTAA TCTAGAAGGA GATATAGATA TTCCCCTTTC GGTTGACCAA AACCTAGACT GGATCATTGC AAGTTTCCAC GAGCCAGTTT TTCCCCCTAA AAATAAGTTA GTACACACCC AAGCATTAAT CAAGATTATC TCATCAGGTC GTGTGGATGC ATTAGGCCAT TTAGGCAATC CAAATTTTGA TTTTGATTTT AAAGAAGTAA TTCAAGAGGC GGTTAAACAT AACGTTGCCA TTGAAATAAA CAATACATCA CTGAAAGGAA CCAGCCGAGT AGGTAGTGTT GACCGTTGCT ATGAAATCGC TAAGATAGCG AAAGAATTAG GCGCGTATAT AACGACAGGA AGTGATGCGC ATTTTTGTCA AGACATAGGA AAATTTGAAA AAGTAGAACA ATTAATTGAT GCCTTAGATT TTCCCTTCGA TAAAATTATT ACTCATTCCC CGAAACAGTT TTTAGCTTTT CTAGCATTAC GTGGACATGC TCCAATTGCT GAATTCGAAG CACTATCAAA ATAA
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Protein sequence | MRIQVDTHTY ASGHAYSTIS ENAFSASTLG LPMFCTTDHA SSMPGAPHYW FFSNQRVLPR FLHGVAILRG CEVNICNLEG DIDIPLSVDQ NLDWIIASFH EPVFPPKNKL VHTQALIKII SSGRVDALGH LGNPNFDFDF KEVIQEAVKH NVAIEINNTS LKGTSRVGSV DRCYEIAKIA KELGAYITTG SDAHFCQDIG KFEKVEQLID ALDFPFDKII THSPKQFLAF LALRGHAPIA EFEALSK
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