Gene VSAL_II0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0887 
Symbol 
ID6962224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp972176 
End bp972919 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content39% 
IMG OID643382155 
Productputative hydrolase 
Protein accessionYP_002265186 
Protein GI209809647 
COG category[R] General function prediction only
[E] Amino acid transport and metabolism 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.214006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTC AGGTAGATAC TCACACTTAT GCTAGTGGCC ATGCTTACAG TACAATCAGT 
GAGAATGCTT TTTCAGCATC CACACTTGGT TTACCTATGT TTTGTACTAC AGATCACGCC
TCTTCAATGC CTGGCGCGCC ACATTATTGG TTTTTCAGTA ATCAGCGCGT ATTACCTCGT
TTTCTTCATG GTGTCGCTAT TCTTAGGGGC TGCGAAGTCA ACATTTGTAA TCTAGAAGGA
GATATAGATA TTCCCCTTTC GGTTGACCAA AACCTAGACT GGATCATTGC AAGTTTCCAC
GAGCCAGTTT TTCCCCCTAA AAATAAGTTA GTACACACCC AAGCATTAAT CAAGATTATC
TCATCAGGTC GTGTGGATGC ATTAGGCCAT TTAGGCAATC CAAATTTTGA TTTTGATTTT
AAAGAAGTAA TTCAAGAGGC GGTTAAACAT AACGTTGCCA TTGAAATAAA CAATACATCA
CTGAAAGGAA CCAGCCGAGT AGGTAGTGTT GACCGTTGCT ATGAAATCGC TAAGATAGCG
AAAGAATTAG GCGCGTATAT AACGACAGGA AGTGATGCGC ATTTTTGTCA AGACATAGGA
AAATTTGAAA AAGTAGAACA ATTAATTGAT GCCTTAGATT TTCCCTTCGA TAAAATTATT
ACTCATTCCC CGAAACAGTT TTTAGCTTTT CTAGCATTAC GTGGACATGC TCCAATTGCT
GAATTCGAAG CACTATCAAA ATAA
 
Protein sequence
MRIQVDTHTY ASGHAYSTIS ENAFSASTLG LPMFCTTDHA SSMPGAPHYW FFSNQRVLPR 
FLHGVAILRG CEVNICNLEG DIDIPLSVDQ NLDWIIASFH EPVFPPKNKL VHTQALIKII
SSGRVDALGH LGNPNFDFDF KEVIQEAVKH NVAIEINNTS LKGTSRVGSV DRCYEIAKIA
KELGAYITTG SDAHFCQDIG KFEKVEQLID ALDFPFDKII THSPKQFLAF LALRGHAPIA
EFEALSK