| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0837 |
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| Symbol | tdh |
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| ID | 6962501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 923099 |
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| End bp | 924130 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643382108 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_002265140 |
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| Protein GI | 209809601 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.178921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTA AAGCACTTTC AAAACTAAAA CCTGAAGAAG GCATTTGGAT GACCGAGGTT
GAAAAACCTG AAATGGGTCA TAATGATATT CTTATCCGTA TTAAGAAAAC GGCTATTTGT
GGTACTGACG TACATATCTA CAACTGGGAT GAGTGGTCAC AAAAAACCAT TCCAGTCCCT
ATGGTTGTAG GTCACGAATA TGTTGGTGAA GTTGTTGGTA TTGGCCAAGA AGTTCGTGGT
TTTGAGATTG GCGACCGTGT TTCTGGCGAA GGTCACATTA CTTGTGGTCA CTGTCGTAAC
TGTCGTGGCG GCCGTACCCA CCTTTGTCGC AATACAACAG GTGTTGGTGT TAACCGTACT
GGTGCTTTCT CTGAGTTCTT AGTTATTCCT GCATTCAATG CATTTAAGAT CCCTGCAGGT
ATTTCAGATG ATCTAGCATC CATCTTTGAC CCATTTGGTA ATGCGGTTCA CACTGCCCTA
TCATTTGATT TAGTGGGTGA AGACGTTCTT ATCACTGGTG CTGGTCCAAT TGGTATTATG
GCTGCTGCGG TTGCAAAACA TGTAGGTGCT CGCCATGTTG TAATTACTGA CGTTAACGAA
TTCCGTTTAG ATCTTGCTAG AAAAATGGGC GTTACTCGTG CAGTAAACGT GATGAACGAG
AAACTTGAAG ACGTAATGTC AGATCTTGGT ATGACTGAAG GCTTTGATGT TGGTCTTGAA
ATGTCTGGTA ATCCATCAGC GTTCAACAGC ATGCTAACCA ACATGAACCA TGGTGGTAAG
ATTTCTTTAT TAGGAATTCC GCCATCTGAC ATGGCAGTAG ATTGGAACCA AGTCATCTTT
AAAGGCTTAG TTATCAAAGG TATTTACGGT CGTGAGATGT TTGAAACTTG GTATAAAATG
GCAAGTTTGA TCCAATCAGG CCTAGATCTA ACGCCAATCA TTACGCACCA CTACAAAATT
GACGATTTCC AAGCAGGCTT CGATATGATG CGTTCAGGAA TGTCAGGAAA AGTAATCTTA
GATTGGGAAT AA
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| Protein sequence | MKIKALSKLK PEEGIWMTEV EKPEMGHNDI LIRIKKTAIC GTDVHIYNWD EWSQKTIPVP
MVVGHEYVGE VVGIGQEVRG FEIGDRVSGE GHITCGHCRN CRGGRTHLCR NTTGVGVNRT
GAFSEFLVIP AFNAFKIPAG ISDDLASIFD PFGNAVHTAL SFDLVGEDVL ITGAGPIGIM
AAAVAKHVGA RHVVITDVNE FRLDLARKMG VTRAVNVMNE KLEDVMSDLG MTEGFDVGLE
MSGNPSAFNS MLTNMNHGGK ISLLGIPPSD MAVDWNQVIF KGLVIKGIYG REMFETWYKM
ASLIQSGLDL TPIITHHYKI DDFQAGFDMM RSGMSGKVIL DWE
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