| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0826 |
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| Symbol | |
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| ID | 6962173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 906482 |
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| End bp | 907273 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643382093 |
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| Product | membrane protein |
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| Protein accession | YP_002265132 |
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| Protein GI | 209809593 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.293934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAG CCTTAGACAT TAGTTGGTCA CTCATGGGTT TATTCAGCCT GACTCTCCTT
ATCCCATTCT CTATCAATCG TTTCTATCAG TTAAATCTCG CTAAAGATAT CACCGTCAGT
GTGCTTCGAA TGGTGGCTCA ACTTGTATTC ATTGGTTTAT ATTTAGAATT TGTGTTTCAA
CTGGATAATC CCCTATTAAA TGTGGTTTGG ATCATCGCGA TGATCAGCAT TGGCTCTAGC
TCTATTGTGT CTAAAGCCAA GCTTCCAAAA CGTCACATTT TCTTCCCTGT ACTTATAGGG
CTTCTTATCG GTTTATCACC TTTGCTGCTG CTATTGAGCG GGTTAATTAT TCAGCCTACC
CCATTTTACA GCGCTCAATA TCTGATCCCT CTTGCAGGCA TGCTATTGGG CAACAGTTTG
AGTGGCAATA TCGTGGCACT GCAAAATCTC TTCACTTCGT TTAAAGAGCG AGAAAGTGAA
TATCACGCAG CGATTGCGCT AGGGGCATCC CCTCAATATG CGTCAATTCC ATTTGTTCGT
GCTGCGATGC AAAAAGCGTT TGCTCCTATC ATGGCATCAA TGGCCACCAC AGGATTAGTT
ACGCTACCGG GCATGATGAC AGGCCAAATT TTAGGCGGTG TAAACCCAAT GGTTGCCATC
AAATATCAAT TACTGATTTT AATCGCCATT TTTGTCATGC TGACTATTTC TGTCACCATC
ACTCTGCAAC TCACCATTAA AAATAGCATT ACAAAAGAAG GGAAAGTGTT GGTATCACTA
CCGACTGATT AA
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| Protein sequence | MQSALDISWS LMGLFSLTLL IPFSINRFYQ LNLAKDITVS VLRMVAQLVF IGLYLEFVFQ
LDNPLLNVVW IIAMISIGSS SIVSKAKLPK RHIFFPVLIG LLIGLSPLLL LLSGLIIQPT
PFYSAQYLIP LAGMLLGNSL SGNIVALQNL FTSFKERESE YHAAIALGAS PQYASIPFVR
AAMQKAFAPI MASMATTGLV TLPGMMTGQI LGGVNPMVAI KYQLLILIAI FVMLTISVTI
TLQLTIKNSI TKEGKVLVSL PTD
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