Gene VSAL_II0819 details

Gene Information

• Locus tag: VSAL_II0819
• Symbol: putA
• ID: 6962167
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: -
• Start bp: 896761
• End bp: 899919
• Gene Length: 3159 bp
• Protein Length: 1052 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643382086
• Product: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
• Protein accession: YP_002265125
• Protein GI: 209809586
• COG category: [C] Energy production and conversion; [E] Amino acid transport and metabolism
• COG ID: [COG0506] Proline dehydrogenase; [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase
• TIGRFAM ID: [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCAAG CGAAAGATGT ATTGTTGTCA TCCATTATTG ACCAGCCTTT ATCGGTGCTA 
TGGTCTGCAA TATCCCCTCT TTATATGGTT GATGAAGCAA AGTGGATTCA AGAGCTCATT 
CCATTAGCAC AACCTACTGC TGATGAAGCC GTCCTAATGT CAGAGCAAGC AGGCGATCTT 
ATCCAACGAG TGCGTGATGA TAAGCAAGCG GTGCAGATGA TAGATGCGTT GCTACTTGAA 
TACAGCTTAG ATACCAAAGA GGGTATTTTA CTGATGTGCT TAGCAGAAGC GTTAATGCGA 
ATCCCAGATG CGGCGACTGC TGATGCTCTT ATTCGTGACA AATTAAGCAC GGCAGATTGG 
AAATCTCATC TTAAAAATTC AGATTCTACG TTTGTAAATG CGTCGACTTG GGGACTATTA 
CTGACGGGTA AAGTCGTCAG CATGGACGTG AAATCGGACG GTTCACCTTC TAATGCGATC 
AGCCGTTTGG TCAATAAATT CTCTGAGCCT GTTATTCGTC AAGCCATGAA TCAAGCAATG 
AAGATCATGG GCCATCAATT TGTACTTGGT AGAACCATTG AAGAAGCGCA GAAGAAAGGC 
AAATCGATGC GCGAAAAGGG ATATACCTAT TCTTTTGATA TGTTAGGTGA GGCGGCATTA 
ACTCAGTCTG ATGCGCATAA ATACTTTAAA GATTACATCA TGGCAATTGA GAGTGTAGGG 
CGAGGGGCAA GCATTGCTAA CTCCGCAGAT CCTACCGTAT CAATTAAGCT TTCAGCGCTT 
CACCCTCGTT ATGAAATGGC GAATAAAGAG CGTGTCATGG GGGAGATGTG TGATTCTGTA 
TTGCAACTTC TTGAACGCGC ACGTGAGTTG GATGTTGGTA TTACGATTGA TGCAGAAGAG 
GCCGATCGTT TAGAGCTTTC TTTGGCTTTA TTTGAAAAAC TGTATCGTCA TGACATCGTT 
AAAGGTTGGG GAAAATTTGG TATCGTTGTT CAAGCGTATT CTAAGCGTGC ATTGCCCGTT 
TTAGTGTGGC TAACTGCGCT AGCAAAAGAG CAAGGCGATA TGATCCCACT TCGCTTGGTG 
AAAGGCGCAT ACTGGGATAC CGAACTTAAA ATATCACAAC AATTTGGTTT TGCTCGCTAC 
CCTGTATTTA CCCGTAAAGA GTCAACCGAT GTGTCTTATC TTGCTTGTGC TCGTTACTTA 
TTAAGTGATC ACGTTAAAGG TAATATCTTC CCACAATTCG CAAGTCACAA TGCACACACG 
GTTGCGGCGA TTGCTTCAAT GGCGACGCAC GATGAGTTTG AATATCAACG TTTGCATGGT 
ATGGGCGATG CGTTATATGA ACATGCAATG GCAATGTTTC AACGCAGTGT TCGTATTTAT 
GCTCCTGTTG GTAGCCACAA AGATTTGTTG CCGTATTTGG TTCGTCGTTT ATTAGAAAAT 
GGCGCAAACA GCTCGTTTGT TCATCGTTTG GTTGATGCAA GTTGCCCTAT CGAAAGTTTA 
ACAGAACACC CAGTTGATAC TCTATTGGCT TGCCCATCGT TTGAAAATCA GCTGATCCCA 
TTACCGCCGC ATATTTTTTC AGATCGTAAA AATTCATACA GCATTAACTT TGATGTTGAG 
AGTGAAGCAG AACCGTTTGA AGCGTTAGTA AAAGAGAAAA TGGACAACTA TTGGAAAGGG 
GGGCCGATTG TTAATAATTC GTGTAATTAC GAAAGCATGA TCAAGGAAAG TGTGTCTGAT 
TTGCATGTTA TCACTTCTCC TTATGATCGC AGTAATGAAG TGGGTTCATT AGTATGGAGT 
TCTCAAGAGT CGGTTTCAAA CGCACTAGAA ATGGCTCATG ACTATTTCCC AACATGGCAA 
GCGACGTCAG TGACTGAACG TGCGGACTAT TTGGATCGCT TAGCAGATAA ACTTGAAGAA 
AATATGCCTG AGCTTGTGGC GCTGTGCCAT AAAGAAGCAG GAAAAACGAT TCACGACAGC 
ATTGATGAAG TACGTGAGGC GGTTGATTTT TGTCGTTACT ATGCCGTTCA AGCCAAATTA 
AATTTCAGCA ATCCAGAAAC GATTGTTGGC TTTGATGATA TTTCTCACCA GATAGCTCGC 
CAAGGTCGTG GTGTGTTTGT GTGTATAAGC CCATGGAATT TCCCACTCGC TATTTTCTTA 
GGCCAAGTAA CCGCCGCATT GGTGGCTGGT AATACGGTTG TTGCAAAACC GGCGGAGCAA 
ACGTCATTGA TTGCCGTTCG TGCCATTGAG CTTTTATTGG AAACGGGTAT TGCGCCACAA 
GCGATTCACT TATTACCGGG TGACGGTAAA ACAGTCGGCG CGCCATTAAC GTCAGATCAC 
CGAGTGGCAG GCGTTGCGTT TACTGGCTCA ACAGAAACCG CACAATTAAT TAACCGCACA 
TTATCAAATC GTACGTTTGA AGGAAAAGGT GTTGCTCCGG TGCCATTTAT TGCTGAAACG 
GGTGGTCAAA ATGCAATGAT AGTAGACAGT ACAGCATTGC CAGAACAGGT AGTTCGAGAT 
GTTGTTCGTT CCGCTTTTTC TTCTGCTGGT CAACGTTGTT CAGCACTTCG AGTATTGTTT 
GTTCAAGAAG ACATAGCAGA ACGTATTCTG AATTTGATTA AAGGCACAAT GGCCGAATTG 
AGTGTTGGTT TACCTGAATT GCACAGCACG GATGTCGGTC CGGTGATTGA TACCAAGGCA 
AAAGAAAAGC TGCTTGCACA CATTGAGAGA ATGACAAAAG AAGGCAAATT ACTTGCTCAA 
GCGACATTAC CTGAATGGGC TGAGAAAGGG GATTTTGTTC CACCAAGTGC GTTTGAAATT 
GATTCGATTA GTCAGCTAGA AAATGAGCAG TTTGGTCCAA TTCTTCATAT TGTTCGTTTC 
AAAGCCAGCG AATTAGACAC CATGGTCGAT GACATTAATG CCACTGGGTT TGGATTAACG 
ATGGGAATAC ACAGTCGTAA TGAAGTCACT TATACCCGTA TTGAGAAAAA CATCAAAGTA 
GGTAACTGCT ACATCAACCG TGATCAAGTT GGTGCGGTGG TGGGAGTTCA AGCCTTTGGT 
GGTCAAGGAC TGTCAGGGAC GGGACCGAAA GCGGGTGGAC CTCGTTATTT ATTCCGTTAT 
ACCCAAGCAA TCGCTTCAAA TTCTGTATCA ACTAAGTGA 

 

Protein sequence

MFQAKDVLLS SIIDQPLSVL WSAISPLYMV DEAKWIQELI PLAQPTADEA VLMSEQAGDL 
IQRVRDDKQA VQMIDALLLE YSLDTKEGIL LMCLAEALMR IPDAATADAL IRDKLSTADW 
KSHLKNSDST FVNASTWGLL LTGKVVSMDV KSDGSPSNAI SRLVNKFSEP VIRQAMNQAM 
KIMGHQFVLG RTIEEAQKKG KSMREKGYTY SFDMLGEAAL TQSDAHKYFK DYIMAIESVG 
RGASIANSAD PTVSIKLSAL HPRYEMANKE RVMGEMCDSV LQLLERAREL DVGITIDAEE 
ADRLELSLAL FEKLYRHDIV KGWGKFGIVV QAYSKRALPV LVWLTALAKE QGDMIPLRLV 
KGAYWDTELK ISQQFGFARY PVFTRKESTD VSYLACARYL LSDHVKGNIF PQFASHNAHT 
VAAIASMATH DEFEYQRLHG MGDALYEHAM AMFQRSVRIY APVGSHKDLL PYLVRRLLEN 
GANSSFVHRL VDASCPIESL TEHPVDTLLA CPSFENQLIP LPPHIFSDRK NSYSINFDVE 
SEAEPFEALV KEKMDNYWKG GPIVNNSCNY ESMIKESVSD LHVITSPYDR SNEVGSLVWS 
SQESVSNALE MAHDYFPTWQ ATSVTERADY LDRLADKLEE NMPELVALCH KEAGKTIHDS 
IDEVREAVDF CRYYAVQAKL NFSNPETIVG FDDISHQIAR QGRGVFVCIS PWNFPLAIFL 
GQVTAALVAG NTVVAKPAEQ TSLIAVRAIE LLLETGIAPQ AIHLLPGDGK TVGAPLTSDH 
RVAGVAFTGS TETAQLINRT LSNRTFEGKG VAPVPFIAET GGQNAMIVDS TALPEQVVRD 
VVRSAFSSAG QRCSALRVLF VQEDIAERIL NLIKGTMAEL SVGLPELHST DVGPVIDTKA 
KEKLLAHIER MTKEGKLLAQ ATLPEWAEKG DFVPPSAFEI DSISQLENEQ FGPILHIVRF 
KASELDTMVD DINATGFGLT MGIHSRNEVT YTRIEKNIKV GNCYINRDQV GAVVGVQAFG 
GQGLSGTGPK AGGPRYLFRY TQAIASNSVS TK