| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0791 |
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| Symbol | nrdD |
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| ID | 6962545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 867833 |
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| End bp | 869953 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643382060 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_002265099 |
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| Protein GI | 209809560 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACATAA CTGTAATCAA ACGAGATGGA AGTCGTGCAG CCTATGAGAA TTCTCGTATT
ATTGACGCTG TAAAAGGCGC TTCAGAGCAG GTTACGCCTG AAATTGAGAG TTATGCTCAG
CTAGTGGCTC ATGCCGTTGA AGTGGCTCTA CAGGGACAAA AAGAAGTGGG TATTCGTCAG
ATCCAAGATC TGGTTGAAAA CGAATTAATG CAAGGGCCAC ACAAAGTGTT AGCGCGTGCT
TATATTGAGT ATCGCCATGA CCGTGACATT GCTCGTGAAA AAATCAGTGT GTTAAATAAA
GAAATTAGCG GCCTGATTGA ACAAAGTAAT GCTGAGTTAT TGAACGAAAA TGCCAATAAA
GACGGCAAAG TTATCCCAAC ACAGCGTGAT TTACTGGCGG GCATTGTGGC TAAACACTAT
GCGACACGTC ATATTTTACC GCGTGATATC GTTCAAGCGC ATGAACGTGG CGAGATCCAT
TACCACGATT TAGATTACGC CCCGTTCTTC CCAATGTTTA ACTGTATGCT GATTGACTTA
AAAGGCATGT TAACCGGTGG CTTTAAAATG GGTAATGCGG AAATCGATAC ACCAAAATCG
ATTGCCACAG CGACAGCAGT AACCGCGCAA ATCATTGCTC AAGTTGCAAG TCATATCTAC
GGCGGAACTA CGATTAACCG TATTGATGAA ATTCTTGCGC CTTATGTAAC GGTTAGTTAC
GAAAAAGCGA AGAAATTGGC TGAGAAATGG AATATTGCGG ATGCTGAAGC GTTTGCTCAA
GCACAAACAG AAAAAGAATG TTATGACGCA TTCCAATCTC TTGAGTATGA AGTAAACACA
TTACATACCG CGAATGGGCA AACGCCTTTT GTTACGTTTG GTTTTGGTTT AGGCACAAGC
TGGGAATCAA AATTAATTCA ACGTTCTATT TTAGCGAACC GTATTGCTGG TTTAGGTAAA
AACCGTAAAA CAGCGGTATT CCCAAAATTA GTCTTCGCTA TTCGTGATGG TTTGAATCAT
AAAAAATCGG ATCCTCATTA CGACATTAAA GAACTTGCGC TTGAATGTGC TACAAAACGT
ATGTACCCAG ACATTCTTAA CTACGACAAA GTGGTTGAAG TGACGGGGTC ATTCAAAACG
CCAATGGGAT GTCGCAGCTT CTTAGACGTT TATGAAGAAA ATGGCGAACA AATTCATGAT
GGCCGTAATA ACATTGGTGT TATCAGCTTA AACCTTCCTC GTGTTGCGAT TGAAGCGAAA
GGTGATGTGA CTGCATTCTA CAAATTGCTT GATGAGCGTC TACTTCTTTG TCGTCGCGCA
TTAGAAACGC GTATCTCTCG TCTTGAAGGC GTGAAGGCTC GTGTGGCTCC TATCCTTTAT
ATGGAAGGGG CGTGTGGTGT TCGTCTGAAA CCAGATGATG ACATCATTAA TATCTTTAAA
AATGGCCGTG CTTCAGTATC GCTGGGTTAC ATTGGTGTGC ATGAAACGAT TGAAGCATTG
TTCGGTAGTG ATGATCACTT ATATGACAAC GCAGAGCTTC AAGTAAAAGC ATTAGACATT
ATTCAATACC TAAAAGATGC TGTAGAAGTA TGGACAAAAG AAACCGGTTT TGGCTTTAGC
CTTTATGGCA CACCAAGTGA AAACTTATGT TCTCGTTTCT GTAAATTAGA TAACACACAG
TTTGGTGTTA TCGATAAAGT GACAGACAAA GGGTACTACA CCAACAGTTT CCACCTTGAT
GTTCAAAAAG TAGTGAACCC ATACGATAAG ATTGATTTTG AAATGCCATA CCCTGAGATC
TCAAGCGGTG GTTTCATTTG TTATGGTGAA TTCCCTAACA TGCAACGCAA TATTGAAGCG
TTAGAAAATG TATGGGATTA CAGCTACAGC CGTGTGCCTT ATTACGGAAC AAACACCCCC
ATTGATGAAT GCTATGAATG TGGTTTTACG GGTGAGTTTG AATGTACAAG TAAAGGTTTC
ACATGTCCTA AATGTGGCAA TCATGGCTCA ACCAAAGTGT CAGTAACACG TCGAGTATGT
GGTTATTTAG GCAGCCCTGA TGCACGTCCA TTTAACTTTG GTAAGCAAGA AGAAGTTCAA
CGTCGAGTGA AACATTTATA A
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| Protein sequence | MNITVIKRDG SRAAYENSRI IDAVKGASEQ VTPEIESYAQ LVAHAVEVAL QGQKEVGIRQ
IQDLVENELM QGPHKVLARA YIEYRHDRDI AREKISVLNK EISGLIEQSN AELLNENANK
DGKVIPTQRD LLAGIVAKHY ATRHILPRDI VQAHERGEIH YHDLDYAPFF PMFNCMLIDL
KGMLTGGFKM GNAEIDTPKS IATATAVTAQ IIAQVASHIY GGTTINRIDE ILAPYVTVSY
EKAKKLAEKW NIADAEAFAQ AQTEKECYDA FQSLEYEVNT LHTANGQTPF VTFGFGLGTS
WESKLIQRSI LANRIAGLGK NRKTAVFPKL VFAIRDGLNH KKSDPHYDIK ELALECATKR
MYPDILNYDK VVEVTGSFKT PMGCRSFLDV YEENGEQIHD GRNNIGVISL NLPRVAIEAK
GDVTAFYKLL DERLLLCRRA LETRISRLEG VKARVAPILY MEGACGVRLK PDDDIINIFK
NGRASVSLGY IGVHETIEAL FGSDDHLYDN AELQVKALDI IQYLKDAVEV WTKETGFGFS
LYGTPSENLC SRFCKLDNTQ FGVIDKVTDK GYYTNSFHLD VQKVVNPYDK IDFEMPYPEI
SSGGFICYGE FPNMQRNIEA LENVWDYSYS RVPYYGTNTP IDECYECGFT GEFECTSKGF
TCPKCGNHGS TKVSVTRRVC GYLGSPDARP FNFGKQEEVQ RRVKHL
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